RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KCTD15Q96SI1 283 aaPredicted RBP14.56□□□□□ -0.08
UBE3B-206ENST00000536398 SNRNP25Q9BV90 132 aaKnown RBP14.56□□□□□ -0.08
UBE3B-206ENST00000536398 MAGEH1Q9H213 219 aa14.56□□□□□ -0.08
UBE3B-206ENST00000536398 DHX35Q9H5Z1 703 aaKnown RBP14.56□□□□□ -0.08
UBE3B-206ENST00000536398 WASF2Q9Y6W5 498 aa14.56□□□□□ -0.08
UBE3B-206ENST00000536398 ASCC3Q8N3C0 2202 aaKnown RBP14.56□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3DA0A087WVF3 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3IA0A087WXS9 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3EA0A087X179 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3KA0A087X1G2 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 A0A1W2PPC4 97 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3FA6NER0 549 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 LRRC72A6NJI9 287 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3LB9A6J9 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 C1QTNF3-AMACRE9PGA6 284 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 KPNA3O00505 521 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 ALOX15BO15296 676 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 KDELR3O43731 214 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 OPHN1O60890 802 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 LRCH4O75427 683 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 GJB3O75712 270 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3HP0C7X1 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 MYBL1P10243 752 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 CD59P13987 128 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 GKP32189 559 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 EIF4A3P38919 411 aaKnown RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 NOVA1P51513 510 aaKnown RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 CLCN6P51797 869 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 AIF1P55008 147 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TAS2R38P59533 333 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 SFSWAPQ12872 951 aaKnown RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 KIF19Q2TAC6 998 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 CARD16Q5EG05 197 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 ERMARDQ5T6L9 678 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3GQ6DHY5 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3CQ6IPX1 549 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TBC1D3Q8IZP1 549 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TMIEQ8NEW7 156 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 OR6K2Q8NGY2 324 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 FNIP1Q8TF40 1166 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 HMCESQ96FZ2 354 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 CAMK1GQ96NX5 476 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 EPAS1Q99814 870 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 TM6SF2Q9BZW4 377 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 RETREG1Q9H6L5 497 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 GAREM1Q9H706 876 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 DNAAF2Q9NVR5 837 aaKnown RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 IL36AQ9UHA7 158 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 NENFQ9UMX5 172 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 AP4E1Q9UPM8 1137 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 SNX11Q9Y5W9 270 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 SCINQ9Y6U3 715 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 CNOT1A5YKK6 2376 aaKnown RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 NCOR2Q9Y618 2525 aa14.55□□□□□ -0.08
UBE3B-206ENST00000536398 NYNRINQ9P2P1 1898 aaKnown RBP14.55□□□□□ -0.08
UBE3B-206ENST00000536398 WASH4PA8MWX3 477 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 RASA4BC9J798 803 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 RASA4O43374 803 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 PLRG1O43660 514 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 LEFTY1O75610 366 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 WNT1P04628 370 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 ADRB1P08588 477 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 IL1R2P27930 398 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 MAT2AP31153 395 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 AFF3P51826 1226 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 TPI1P60174 286 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 HLA-BQ31612 363 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 CCDC122Q5T0U0 273 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 ATXN7L2Q5T6C5 722 aaPredicted RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 PIP5KL1Q5T9C9 394 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 SPECC1LQ69YQ0 1117 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 TXNRD3NBQ6F5E7 133 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 ALKBH5Q6P6C2 394 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 PIP4P1Q86T03 277 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 ZNF354CQ86Y25 554 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 VSTM4Q8IW00 320 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 PCDH20Q8N6Y1 951 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 VOPP1Q96AW1 172 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 IQCDQ96DY2 449 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 TRIM11Q96F44 468 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 CELF6Q96J87 481 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 CEP44Q9C0F1 390 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 MRPL47Q9HD33 250 aaKnown RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 ANKRD6Q9Y2G4 727 aa14.54□□□□□ -0.08
UBE3B-206ENST00000536398 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
UBE3B-206ENST00000536398 EEF2KO00418 725 aaKnown RBP14.53□□□□□ -0.08
UBE3B-206ENST00000536398 CBFA2T2O43439 604 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 BUB1O43683 1085 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 SH3BP5O60239 455 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 PRPSAP2O60256 369 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 RNF8O76064 485 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 PRNPP04156 253 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 CYP1A2P05177 515 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 TPM3P06753 285 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 DESP17661 470 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 HNRNPH3P31942 346 aaKnown RBP14.53□□□□□ -0.08
UBE3B-206ENST00000536398 ETFBP38117 255 aa14.53□□□□□ -0.08
UBE3B-206ENST00000536398 RECQLP46063 649 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms