RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CHPT1Q8WUD6 406 aa14.22□□□□□ -0.13
LIG1-203ENST00000536218 POU2F3Q9UKI9 436 aa14.22□□□□□ -0.13
LIG1-203ENST00000536218 PRELID1Q9Y255 219 aa14.22□□□□□ -0.13
LIG1-203ENST00000536218 SCN4AP35499 1836 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 TRIM64CA6NLI5 447 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 CFAP99D6REC4 459 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 AIM2O14862 343 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 PFDN6O15212 129 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 KLHL2O95198 593 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 TRUB2O95900 331 aaKnown RBP14.21□□□□□ -0.13
LIG1-203ENST00000536218 CD247P20963 164 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 FGFR3P22607 806 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 IGFBP6P24592 240 aaPredicted RBP14.21□□□□□ -0.13
LIG1-203ENST00000536218 ALDH3B2P48448 385 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 BMXP51813 675 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 STX3Q13277 289 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 PHKG1Q16816 387 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 FAM47CQ5HY64 1035 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 RNASEH2BQ5TBB1 312 aaKnown RBP14.21□□□□□ -0.13
LIG1-203ENST00000536218 FAM71DQ8N9W8 422 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 KCNK16Q96T55 309 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 CNTN3Q9P232 1028 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 DAPK2Q9UIK4 370 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 CARD8Q9Y2G2 431 aa14.21□□□□□ -0.13
LIG1-203ENST00000536218 MYADML2A6NDP7 307 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 PRPSAP2O60256 369 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 EIF3EP60228 445 aaKnown RBP14.21□□□□□ -0.14
LIG1-203ENST00000536218 SOX4Q06945 474 aaPredicted RBP14.21□□□□□ -0.14
LIG1-203ENST00000536218 ARL13BQ3SXY8 428 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 FGD3Q5JSP0 725 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 POLNQ7Z5Q5 900 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 SETD3Q86TU7 594 aaPredicted RBP14.21□□□□□ -0.14
LIG1-203ENST00000536218 UNC45BQ8IWX7 931 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 LILRA2Q8N149 483 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 ZFP42Q96MM3 310 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 PLEKHA5Q9HAU0 1116 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 PARVBQ9HBI1 364 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 NCKIPSDQ9NZQ3 722 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 DNAJC16Q9Y2G8 782 aa14.21□□□□□ -0.14
LIG1-203ENST00000536218 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 FBXO21O94952 628 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PRDX6P30041 224 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 ZNF143P52747 638 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CTBSQ01459 385 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 FBXO47Q5MNV8 452 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PERM1Q5SV97 790 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 RWDD4Q6NW29 188 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 UTS2BQ765I0 119 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PEX5LQ8IYB4 626 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 MYO1HQ8N1T3 1032 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PPM1NQ8N819 430 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 TBC1D15Q8TC07 691 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 FNIP1Q8TF40 1166 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 NDRG1Q92597 394 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CCDC138Q96M89 665 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 CEP295NLQ96MC4 621 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 MAGEB5Q9BZ81 275 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 NRDE2Q9H7Z3 1164 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 CORINQ9Y5Q5 1042 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 C17orf102A2RUQ5 167 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 C2CD4BA6NLJ0 364 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 MEIS3P2A8K0S8 358 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 NOTOA8MTQ0 251 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 DCXO43602 365 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PGK1P00558 417 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 PTPN1P18031 435 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 TFE3P19532 575 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 TCN1P20061 433 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 JAK1P23458 1154 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 ACAT1P24752 427 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 GNL1P36915 607 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CPT1AP50416 773 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 ATXN1P54253 815 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 PKNOX1P55347 436 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 BMPR2Q13873 1038 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 FSCN1Q16658 493 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 USP41Q3LFD5 358 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 VWA5B1Q5TIE3 1220 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 NT5DC4Q86YG4 428 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 ARRDC4Q8NCT1 418 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 ADCY4Q8NFM4 1077 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 GABPB2Q8TAK5 448 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 SPATA18Q8TC71 538 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 TFB1MQ8WVM0 346 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CNPY3Q9BT09 278 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 CCDC68Q9H2F9 335 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 XAB2Q9HCS7 855 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 PADI4Q9UM07 663 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 MBLAC1A4D2B0 266 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 KPNA7A9QM74 516 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 SEC24DO94855 1032 aaPredicted RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 CSPG5O95196 566 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 HSPA8P11142 646 aaKnown RBP14.2□□□□□ -0.14
LIG1-203ENST00000536218 EPHA3P29320 983 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 GABRB2P47870 512 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 HSPA13P48723 471 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 ZBTB6Q15916 424 aa14.2□□□□□ -0.14
LIG1-203ENST00000536218 CXCL17Q6UXB2 119 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms