RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 PARVAQ9NVD7 372 aa16.74■□□□□ 0.27
ATL3-202ENST00000535789 FCF1Q9Y324 198 aaKnown RBP16.74■□□□□ 0.27
ATL3-202ENST00000535789 WASF2Q9Y6W5 498 aa16.74■□□□□ 0.27
ATL3-202ENST00000535789 ARID1BQ8NFD5 2236 aaPredicted RBP16.73■□□□□ 0.27
ATL3-202ENST00000535789 A0A087X0T9 212 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 A0A1B0GVT2 93 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 FAM47DPA6NHR8 397 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 LRCH4O75427 683 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 FAM228BP0C875 321 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 CD59P13987 128 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 CLCN6P51797 869 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 PSAPL1Q6NUJ1 521 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 PPP1R2P3Q6NXS1 205 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 LEKR1Q6ZMV7 388 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 DPY19L3Q6ZPD9 716 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 PIP4P1Q86T03 277 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 RTL3Q8N8U3 475 aaKnown RBP16.73■□□□□ 0.27
ATL3-202ENST00000535789 SPC24Q8NBT2 197 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 DEFB124Q8NES8 71 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 OR2T34Q8NGX1 318 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 GANCQ8TET4 914 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 FNIP1Q8TF40 1166 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 ARHGEF26Q96DR7 871 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 SLC6A18Q96N87 628 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 KCTD15Q96SI1 283 aaPredicted RBP16.73■□□□□ 0.27
ATL3-202ENST00000535789 OMDQ99983 421 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 DNAAF2Q9NVR5 837 aaKnown RBP16.73■□□□□ 0.27
ATL3-202ENST00000535789 AP4E1Q9UPM8 1137 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 CEP295Q9C0D2 2601 aa16.73■□□□□ 0.27
ATL3-202ENST00000535789 LRP4O75096 1905 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 PLRG1O43660 514 aaKnown RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 CREB3O43889 395 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 WNT1P04628 370 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 GNSP15586 552 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 KCNA4P22459 653 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 CD27P26842 260 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 CHRNA3P32297 505 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 CSNK1EP49674 416 aaKnown RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 N4BP2L1Q5TBK1 243 aaPredicted RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 NETO2Q8NC67 525 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 OR14C36Q8NHC7 312 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 GRIN3AQ8TCU5 1115 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 OSGEPQ9NPF4 335 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 IMPACTQ9P2X3 320 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 NCKAP1Q9Y2A7 1128 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 FNDC3AQ9Y2H6 1198 aaKnown RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATL3-202ENST00000535789 COL5A1P20908 1838 aaPredicted RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 PLXNB3Q9ULL4 1909 aa16.72■□□□□ 0.27
ATL3-202ENST00000535789 MAP1BP46821 2468 aaKnown RBP16.72■□□□□ 0.27
ATL3-202ENST00000535789 A0A1W2PPC4 97 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 ANKRD62A6NC57 917 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 WASH4PA8MWX3 477 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 LATO43561 262 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 RAMP2O60895 175 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 SERPING1P05155 500 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 IL1R2P27930 398 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 EPHB2P29323 1055 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 MIPP30301 263 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 GKP32189 559 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 NOVA1P51513 510 aaKnown RBP16.71■□□□□ 0.27
ATL3-202ENST00000535789 AIF1P55008 147 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 FAM193AP78312 1265 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 TRIM14Q14142 442 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 TXNRD3NBQ6F5E7 133 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 CPNE8Q86YQ8 564 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 HMCESQ96FZ2 354 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 BTBD6Q96KE9 485 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 TM6SF2Q9BZW4 377 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 MAGEH1Q9H213 219 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 PCSK1NQ9UHG2 260 aa16.71■□□□□ 0.27
ATL3-202ENST00000535789 C1QTNF3-AMACRE9PGA6 284 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 OPHN1O60890 802 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 LEFTY1O75610 366 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 SYPP08247 313 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 CSRP1P21291 193 aaKnown RBP16.7■□□□□ 0.26
ATL3-202ENST00000535789 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
ATL3-202ENST00000535789 GRIA4P48058 902 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 CCR5P51681 352 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 CCNHP51946 323 aaPredicted RBP16.7■□□□□ 0.26
ATL3-202ENST00000535789 KIF19Q2TAC6 998 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 RETSATQ6NUM9 610 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 DSG4Q86SJ6 1040 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 PCDH20Q8N6Y1 951 aaKnown RBP16.7■□□□□ 0.26
ATL3-202ENST00000535789 OR6K2Q8NGY2 324 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 IQCDQ96DY2 449 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 CAMK1GQ96NX5 476 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 EPAS1Q99814 870 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 CEP44Q9C0F1 390 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 RETREG1Q9H6L5 497 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 LRRC19Q9H756 370 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 IL36AQ9UHA7 158 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 LUC7L2Q9Y383 392 aaKnown RBP16.7■□□□□ 0.26
ATL3-202ENST00000535789 MFHAS1Q9Y4C4 1052 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 SNX11Q9Y5W9 270 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
ATL3-202ENST00000535789 TPRP12270 2363 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms