RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 IL10RBQ08334 325 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 GALNT2Q10471 571 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 PPP2R5EQ16537 467 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 INO80DQ53TQ3 878 aaPredicted RBP12.29□□□□□ -0.44
CHD4-203ENST00000535717 MEI1Q5TIA1 1274 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 KAZNQ674X7 775 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 C22orf39Q6P5X5 142 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 NPNTQ6UXI9 565 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 WDR5BQ86VZ2 330 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 STK40Q8N2I9 435 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 TRIM58Q8NG06 486 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 ISG20Q96AZ6 181 aaKnown RBP12.29□□□□□ -0.44
CHD4-203ENST00000535717 FAM129BQ96TA1 746 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 HERPUD2Q9BSE4 406 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 HEMGNQ9BXL5 484 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 FAM126AQ9BYI3 521 aaPredicted RBP12.29□□□□□ -0.44
CHD4-203ENST00000535717 TPSD1Q9BZJ3 242 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 CEP44Q9C0F1 390 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 RSPH9Q9H1X1 276 aaPredicted RBP12.29□□□□□ -0.44
CHD4-203ENST00000535717 KCNH6Q9H252 994 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 SP110Q9HB58 689 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 DTLQ9NZJ0 730 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHD4-203ENST00000535717 UBA2Q9UBT2 640 aaPredicted RBP12.29□□□□□ -0.44
CHD4-203ENST00000535717 HEY1Q9Y5J3 304 aa12.29□□□□□ -0.44
CHD4-203ENST00000535717 CCDC163A0A0D9SF12 145 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 AXIN1O15169 862 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 BNIP3LO60238 219 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 CST8O60676 142 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 PEX11BO96011 259 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 C7P10643 843 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 PTPN7P35236 360 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 GARSP41250 739 aaKnown RBP12.28□□□□□ -0.44
CHD4-203ENST00000535717 RPS14P62263 151 aaKnown RBP12.28□□□□□ -0.44
CHD4-203ENST00000535717 ZNF211Q13398 564 aaPredicted RBP12.28□□□□□ -0.44
CHD4-203ENST00000535717 TFDP2Q14188 446 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 ELAVL3Q14576 367 aaKnown RBP12.28□□□□□ -0.44
CHD4-203ENST00000535717 CYTH1Q15438 398 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 DCAF12L1Q5VU92 463 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 LONP2Q86WA8 852 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 TMPRSS6Q8IU80 811 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 LRRC49Q8IUZ0 686 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 PGBD3Q8N328 593 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 PCDH20Q8N6Y1 951 aaKnown RBP12.28□□□□□ -0.44
CHD4-203ENST00000535717 OR2A12Q8NGT7 310 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 CASKIN2Q8WXE0 1202 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 OSBPL8Q9BZF1 889 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 FBRSQ9HAH7 460 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 ZSCAN32Q9NX65 697 aa12.28□□□□□ -0.44
CHD4-203ENST00000535717 SAE1Q9UBE0 346 aaPredicted RBP12.28□□□□□ -0.44
CHD4-203ENST00000535717 MCF2LO15068 1137 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 PECAM1P16284 738 aaPredicted RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 MX2P20592 715 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 PTPN5P54829 565 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 SLC10A7Q0GE19 358 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 RPS6KA1Q15418 735 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 CARD16Q5EG05 197 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 ZNF776Q68DI1 518 aaPredicted RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 KIAA1324Q6UXG2 1013 aaKnown RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 DPY19L3Q6ZPD9 716 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 BBS12Q6ZW61 710 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 METTL3Q86U44 580 aaKnown RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 CACUL1Q86Y37 369 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 MMAAQ8IVH4 418 aaKnown RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 CHST14Q8NCH0 376 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 ZBTB44Q8NCP5 570 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 LRRN4Q8WUT4 740 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 OR8D1Q8WZ84 308 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.45
CHD4-203ENST00000535717 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 ZNF599Q96NL3 588 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 OLFM3Q96PB7 478 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 TSGA13Q96PP4 275 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 TLR10Q9BXR5 811 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 TM6SF2Q9BZW4 377 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 CD93Q9NPY3 652 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 LHX3Q9UBR4 397 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 RAPGEFL1Q9UHV5 662 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 EFR3BQ9Y2G0 817 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 HCN4Q9Y3Q4 1203 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 FRYLO94915 3013 aa12.27□□□□□ -0.45
CHD4-203ENST00000535717 RNF103O00237 685 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 ALOX15BO15296 676 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 RNASEH1O60930 286 aaKnown RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 GSRP00390 522 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 CTSLP07711 333 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 TGM2P21980 687 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 CCNCP24863 283 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 CHRNA3P32297 505 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 CETN2P41208 172 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 RECQLP46063 649 aaPredicted RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 PSMD8P48556 350 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 NR2C2P49116 596 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 CCNHP51946 323 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms