RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 RETSATQ6NUM9 610 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 MFSD7Q6UXD7 560 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 AADATQ8N5Z0 425 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 SUMF1Q8NBK3 374 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 OR2A12Q8NGT7 310 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 ZNF419Q96HQ0 510 aaPredicted RBP14.29□□□□□ -0.12
VPS11-205ENST00000534551 PPP1R9BQ96SB3 815 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 SP110Q9HB58 689 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 RCOR3Q9P2K3 495 aaPredicted RBP14.29□□□□□ -0.12
VPS11-205ENST00000534551 SUN2Q9UH99 717 aa14.29□□□□□ -0.12
VPS11-205ENST00000534551 ATXN2Q99700 1313 aaKnown RBP14.29□□□□□ -0.12
VPS11-205ENST00000534551 A0A1W2PP55 124 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 PRR23AA6NEV1 266 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 ARHGAP42A6NI28 874 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 IL1BP01584 269 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 KRT10P13645 584 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 RGRP47804 291 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 CLCN6P51797 869 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 CCNHP51946 323 aaPredicted RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 ZNF135P52742 658 aaPredicted RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 DYNLT1P63172 113 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 KIF5AQ12840 1032 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 ELAVL3Q14576 367 aaKnown RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 GSE1Q14687 1217 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PDK2Q15119 407 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 E2F5Q15329 346 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 CCDC6Q16204 474 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PLK5Q496M5 336 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 USP39Q53GS9 565 aaKnown RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 AADACL2Q6P093 401 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 NPNTQ6UXI9 565 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 DPY19L3Q6ZPD9 716 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PLD5Q8N7P1 536 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 OR8D1Q8WZ84 308 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 NKD2Q969F2 451 aaPredicted RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 VOPP1Q96AW1 172 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 SPACA7Q96KW9 195 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 HERPUD2Q9BSE4 406 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 IRF2BPLQ9H1B7 796 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PABPC3Q9H361 631 aaKnown RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 RETREG1Q9H6L5 497 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 LHX3Q9UBR4 397 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 UBA2Q9UBT2 640 aaPredicted RBP14.28□□□□□ -0.12
VPS11-205ENST00000534551 HPCAL4Q9UM19 191 aa14.28□□□□□ -0.12
VPS11-205ENST00000534551 PI4KAP42356 2102 aa14.27□□□□□ -0.12
VPS11-205ENST00000534551 WDR87Q6ZQQ6 2873 aa14.27□□□□□ -0.12
VPS11-205ENST00000534551 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 MUSKO15146 869 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 INSIG1O15503 277 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 ZBTB24O43167 697 aaPredicted RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 DNTTP04053 509 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 PLA2G5P39877 138 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 ADCY2Q08462 1091 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 SLC10A2Q12908 348 aaPredicted RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 PAFAH1B3Q15102 231 aaKnown RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 CYTH1Q15438 398 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 LRRC38Q5VT99 294 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 PMS2CLQ68D20 193 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 TMEFF1Q8IYR6 380 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 RYBPQ8N488 228 aaPredicted RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 PCDH20Q8N6Y1 951 aaKnown RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 TOE1Q96GM8 510 aaKnown RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 RNF157Q96PX1 679 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 DUSP15Q9H1R2 295 aaPredicted RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 ZDHHC6Q9H6R6 413 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 LZTFL1Q9NQ48 299 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 IPO11Q9UI26 975 aaKnown RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 GUCA1BQ9UMX6 200 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 ARIH1Q9Y4X5 557 aaPredicted RBP14.27□□□□□ -0.13
VPS11-205ENST00000534551 WASF2Q9Y6W5 498 aa14.27□□□□□ -0.13
VPS11-205ENST00000534551 TTC24A2A3L6 582 aaPredicted RBP14.26□□□□□ -0.13
VPS11-205ENST00000534551 PROB1E7EW31 1015 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 PEX11BO96011 259 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 PTMAP06454 111 aaKnown RBP14.26□□□□□ -0.13
VPS11-205ENST00000534551 CCDC175P0C221 793 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 ACADMP11310 421 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
VPS11-205ENST00000534551 SLC8A1P32418 973 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 ACSL1P33121 698 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 DRD3P35462 400 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 CDKN2BP42772 138 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 PTGER3P43115 390 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 RPL6Q02878 288 aaKnown RBP14.26□□□□□ -0.13
VPS11-205ENST00000534551 GALNT2Q10471 571 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 KAZNQ674X7 775 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 NT5DC3Q86UY8 548 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 SLC41A1Q8IVJ1 513 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 CCDC50Q8IVM0 306 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 KATNAL2Q8IYT4 538 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 DCLK2Q8N568 766 aa14.26□□□□□ -0.13
VPS11-205ENST00000534551 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms