RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	SPATA31D4	Q6ZUB0	917 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TPRG1	Q6ZUI0	275 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TAOK1	Q7L7X3	1001 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SGMS1	Q86VZ5	419 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CCDC28A	Q8IWP9	274 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	OR1N1	Q8NGS0	311 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	BPIFB1	Q8TDL5	484 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	EID2B	Q96D98	161 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	HIC2	Q96JB3	615 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SLC46A2	Q9BY10	475 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	GPR87	Q9BY21	358 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	REXO4	Q9GZR2	422 aa	Known RBP	5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	RNPEP	Q9H4A4	650 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PRDM16	Q9HAZ2	1276 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CPNE5	Q9HCH3	593 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ENTPD7	Q9NQZ7	604 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	HOXC10	Q9NYD6	342 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	EPS15L1	Q9UBC2	864 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PNMA2	Q9UL42	364 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SHOC2	Q9UQ13	582 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	LZTS1	Q9Y250	596 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MRPS17	Q9Y2R5	130 aa	Known RBP	5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CHST2	Q9Y4C5	530 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	RYR3	Q15413	4870 aa		5.01	□□□□□ -1.61
ECHDC1-223	ENST00000534442	BCLAF3	A2AJT9	711 aa	Known RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	OTOL1	A6NHN0	477 aa	Predicted RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ASNA1	O43681	348 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PRICKLE3	O43900	615 aa	Predicted RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ZFPL1	O95159	310 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CCDC192	P0DO97	292 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PECAM1	P16284	738 aa	Predicted RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	KCNA2	P16389	499 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	BMP7	P18075	431 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ALDH7A1	P49419	539 aa	Known RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ARL4C	P56559	192 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	LOXL3	P58215	753 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SEMG2	Q02383	582 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	KRT17	Q04695	432 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CCDC173	Q0VFZ6	552 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MYO1E	Q12965	1108 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TRIP6	Q15654	476 aa	Known RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SLC5A9	Q2M3M2	681 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PTCHD3	Q3KNS1	767 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MGAT5B	Q3V5L5	792 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ZFYVE27	Q5T4F4	411 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MANEAL	Q5VSG8	457 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ARL6IP4	Q66PJ3	421 aa	Known RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TANGO2	Q6ICL3	276 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TMEM108	Q6UXF1	575 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CYP26C1	Q6V0L0	522 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	WDR5B	Q86VZ2	330 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CIR1	Q86X95	450 aa	Predicted RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	GALNT15	Q8N3T1	639 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CMAS	Q8NFW8	434 aa	Predicted RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SPATA20	Q8TB22	786 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	SEPT8	Q92599	483 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MED15	Q96RN5	788 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	NAP1L4	Q99733	375 aa	Known RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	KATNAL1	Q9BW62	490 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	XYLT2	Q9H1B5	865 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	FAM83D	Q9H4H8	585 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CXorf36	Q9H7Y0	433 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CWC25	Q9NXE8	425 aa	Predicted RBP	5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	DTNA	Q9Y4J8	743 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MYO16	Q9Y6X6	1858 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MEGF8	Q7Z7M0	2845 aa		5	□□□□□ -1.61
ECHDC1-223	ENST00000534442	GOLGA4	Q13439	2230 aa	Known RBP	4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	FAM149A	A5PLN7	773 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	AQP7P3	A6NL99	342 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	GOLGA6L6	A8MZA4	724 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	AHRR	A9YTQ3	701 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442		E7ENX8	843 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PIAS2	O75928	621 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	GPANK1	O95872	356 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	HLA-E	P13747	358 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	IDE	P14735	1019 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	NPPB	P16860	134 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CD53	P19397	219 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MST1	P26927	711 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	LRPAP1	P30533	357 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MAPK9	P45984	424 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PXN	P49023	591 aa	Predicted RBP	4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	ANXA11	P50995	505 aa	Known RBP	4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PNLIPRP1	P54315	467 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	IRX4	P78413	519 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	HHEX	Q03014	270 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TAP2	Q03519	686 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	HTR4	Q13639	388 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	TRIM71	Q2Q1W2	868 aa	Known RBP	4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	PREPL	Q4J6C6	727 aa	Predicted RBP	4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	DCAF6	Q58WW2	860 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	FAXC	Q5TGI0	409 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	CACHD1	Q5VU97	1274 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MRNIP	Q6NTE8	343 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	LAYN	Q6UX15	382 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	GPR149	Q86SP6	731 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	KRT73	Q86Y46	540 aa		4.99	□□□□□ -1.61
ECHDC1-223	ENST00000534442	MAPKAPK5	Q8IW41	473 aa		4.99	□□□□□ -1.61

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