RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	SMARCE1	Q969G3	411 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	FKBP10	Q96AY3	582 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	RMDN1	Q96DB5	314 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	PABPC5	Q96DU9	382 aa	Known RBP	4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	EDC3	Q96F86	508 aa	Known RBP	4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	BOD1	Q96IK1	185 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	ZNF845	Q96IR2	970 aa	Predicted RBP	4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	FER1L6-AS2	Q96M78	137 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	GPR78	Q96P69	363 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	DCLRE1C	Q96SD1	692 aa	Known RBP	4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	HGH1	Q9BTY7	390 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	SNX15	Q9NRS6	342 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	TMEM248	Q9NWD8	314 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	MGAT4C	Q9UBM8	478 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	DNAJB9	Q9UBS3	223 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	CTNNAL1	Q9UBT7	734 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	SESN1	Q9Y6P5	492 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	GPRASP1	Q5JY77	1395 aa		4.25	□□□□□ -1.73
PICALM-222	ENST00000534375	NCAN	O14594	1321 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	GTPBP10	A4D1E9	387 aa	Known RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	CHL1	O00533	1208 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	CES2	O00748	559 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	PRY	O14603	147 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	PRRG2	O14669	202 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	TMPRSS11D	O60235	418 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	HSP90AB1	P08238	724 aa	Known RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	FPR3	P25089	353 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	ATP5D	P30049	168 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SLC8A1	P32418	973 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	BUD31	P41223	144 aa	Predicted RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	CAPZA2	P47755	286 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	PIP4K2A	P48426	406 aa	Predicted RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	MMP14	P50281	582 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	MFAP4	P55083	255 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	CTSW	P56202	376 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	MRPS5	P82675	430 aa	Known RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	LMAN2	Q12907	356 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	RUNX2	Q13950	521 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	GSTA3	Q16772	222 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	C9orf152	Q5JTZ5	239 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	TCERG1L	Q5VWI1	586 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	TXNDC8	Q6A555	127 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	CAVIN1	Q6NZI2	390 aa	Known RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SLC30A9	Q6PML9	568 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	TSSK4	Q6SA08	328 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	NEK8	Q86SG6	692 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	TADA2B	Q86TJ2	420 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	AACS	Q86V21	672 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	FAM124A	Q86V42	546 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	FAM160B2	Q86V87	743 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	TMEM200A	Q86VY9	491 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	EPHX4	Q8IUS5	362 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	NUP93	Q8N1F7	819 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	ANKRD35	Q8N283	1001 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SYT2	Q8N9I0	419 aa	Predicted RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SCAI	Q8N9R8	606 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	APPL2	Q8NEU8	664 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	HSPH1	Q92598	858 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SAT2	Q96F10	170 aa	Predicted RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	ELMOD3	Q96FG2	381 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	PGAM5	Q96HS1	289 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	DGAT2	Q96PD7	388 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	FYTTD1	Q96QD9	318 aa	Known RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SNX18	Q96RF0	628 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	PAFAH2	Q99487	392 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	CINP	Q9BW66	212 aa	Predicted RBP	4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	KLC2	Q9H0B6	622 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	USP29	Q9HBJ7	922 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	GALNT9	Q9HCQ5	603 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	RRP7BP	Q9NSQ0	103 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SETD4	Q9NVD3	440 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	NLK	Q9UBE8	527 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	RASAL2	Q9UJF2	1139 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	SLC25A13	Q9UJS0	675 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	ANAPC5	Q9UJX4	755 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	A4GNT	Q9UNA3	340 aa		4.24	□□□□□ -1.73
PICALM-222	ENST00000534375	XDH	P47989	1333 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	GOLGA6L6	A8MZA4	724 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	TAF4	O00268	1085 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	QSOX1	O00391	747 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	HBP1	O60381	514 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	CNTN5	O94779	1100 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SCAF4	O95104	1147 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	BAG2	O95816	211 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	C1R	P00736	705 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	HEXA	P06865	529 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	RFPL3S	P0C7P2	107 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	MYBL1	P10243	752 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	HOXA5	P20719	270 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	GP5	P40197	560 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	HDAC4	P56524	1084 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	SUMO2	P61956	95 aa	Known RBP	4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	CYP4A11	Q02928	519 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	KIAA2012	Q0VF49	1180 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	REST	Q13127	1097 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	FGFBP1	Q14512	234 aa		4.23	□□□□□ -1.73
PICALM-222	ENST00000534375	RNPS1	Q15287	305 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms