RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 RFTN1Q14699 578 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-215ENST00000533778 MAP7D1Q3KQU3 841 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 CARD16Q5EG05 197 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 TMCO4Q5TGY1 634 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 NCBP2-AS2Q69YL0 99 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 PEX26Q7Z412 305 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 MMAAQ8IVH4 418 aaKnown RBP20.19■□□□□ 0.82
CHEK1-215ENST00000533778 OR2A12Q8NGT7 310 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 EXD1Q8NHP7 514 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 NKD2Q969F2 451 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-215ENST00000533778 FAM129BQ96TA1 746 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 USP36Q9P275 1121 aaKnown RBP20.19■□□□□ 0.82
CHEK1-215ENST00000533778 GUCA1BQ9UMX6 200 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 NCKAP1Q9Y2A7 1128 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 A0A0U1RQJ8 604 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 MIF4GDA9UHW6 222 aaKnown RBP20.18■□□□□ 0.82
CHEK1-215ENST00000533778 J3KR12 359 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 APOL1O14791 398 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 RHOBTB1O94844 696 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 TMCC1O94876 653 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 GSRP00390 522 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 IL1BP01584 269 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 IGLV3-19P01714 112 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 PRNPP04156 253 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 C5AR1P21730 350 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 CTNNA2P26232 953 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 CETN2P41208 172 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 SNRPD1P62314 119 aaKnown RBP20.18■□□□□ 0.82
CHEK1-215ENST00000533778 SRSF5Q13243 272 aaKnown RBP20.18■□□□□ 0.82
CHEK1-215ENST00000533778 TFDP2Q14188 446 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 ELF2Q15723 593 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 CST6Q15828 149 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 LEKR1Q6ZMV7 388 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 PRR23BQ6ZRT6 265 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 USP30Q70CQ3 517 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 RFX6Q8HWS3 928 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 ATPAF2Q8N5M1 289 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 PQLC3Q8N755 202 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 UBL4BQ8N7F7 174 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 RLN3Q8WXF3 142 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 ZNF830Q96NB3 372 aaPredicted RBP20.18■□□□□ 0.82
CHEK1-215ENST00000533778 ZNF599Q96NL3 588 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 TNKS2Q9H2K2 1166 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 PABPC3Q9H361 631 aaKnown RBP20.18■□□□□ 0.82
CHEK1-215ENST00000533778 PDFQ9HBH1 243 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 PPM1HQ9ULR3 514 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 MFHAS1Q9Y4C4 1052 aa20.18■□□□□ 0.82
CHEK1-215ENST00000533778 DOCK4Q8N1I0 1966 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 MUC22E2RYF6 1773 aaPredicted RBP20.17■□□□□ 0.82
CHEK1-215ENST00000533778 ZNF821O75541 412 aaPredicted RBP20.17■□□□□ 0.82
CHEK1-215ENST00000533778 LMNAP02545 664 aaKnown RBP20.17■□□□□ 0.82
CHEK1-215ENST00000533778 CD6P30203 668 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 CHRNA3P32297 505 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 SLC8A1P32418 973 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 CDKN2BP42772 138 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 TPMTP51580 245 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 RWDD2BP57060 319 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 COPS2P61201 443 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 RHOAP61586 193 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 GALNT2Q10471 571 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 TFDP3Q5H9I0 405 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 SLC9A4Q6AI14 798 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 MFSD7Q6UXD7 560 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 SPOCD1Q6ZMY3 1216 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 NT5DC3Q86UY8 548 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 KBTBD6Q86V97 674 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 CACUL1Q86Y37 369 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 CCDC50Q8IVM0 306 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 BBS5Q8N3I7 341 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 TMIEQ8NEW7 156 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 OR2AP1Q8NGE2 309 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 GANCQ8TET4 914 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 KRT35Q92764 455 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 ZC3H10Q96K80 434 aaKnown RBP20.17■□□□□ 0.82
CHEK1-215ENST00000533778 ALS2CR12Q96Q35 445 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 LZTFL1Q9NQ48 299 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 IL36AQ9UHA7 158 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 CYP8B1Q9UNU6 501 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 INVSQ9Y283 1065 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 PPP2R2CQ9Y2T4 447 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 ACTL7AQ9Y615 435 aa20.17■□□□□ 0.82
CHEK1-215ENST00000533778 IGHV1OR15-9A0A0B4J2B8 117 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 NDUFS2O75306 463 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 PSMD8P48556 350 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 RAD51Q06609 339 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 CCDC15Q0P6D6 951 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 CCDC173Q0VFZ6 552 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 TAZQ16635 292 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 SPDYCQ5MJ68 293 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 TIGD7Q6NT04 549 aaPredicted RBP20.16■□□□□ 0.82
CHEK1-215ENST00000533778 DPY19L3Q6ZPD9 716 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 BZW1Q7L1Q6 419 aaKnown RBP20.16■□□□□ 0.82
CHEK1-215ENST00000533778 LPCAT2Q7L5N7 544 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 RYBPQ8N488 228 aaPredicted RBP20.16■□□□□ 0.82
CHEK1-215ENST00000533778 NETO2Q8NC67 525 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 LRIG1Q96JA1 1093 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 GDAP1L1Q96MZ0 367 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 OMDQ99983 421 aa20.16■□□□□ 0.82
CHEK1-215ENST00000533778 HEPHQ9BQS7 1158 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms