RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 DFFAO00273 331 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 MAFKO60675 156 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 CST8O60676 142 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 HOXB2P14652 356 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ZFXP17010 805 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 CXCL12P48061 93 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 CCR3P51677 355 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 CAMK2GQ13555 558 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 SWT1Q5T5J6 900 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 NPNTQ6UXI9 565 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 BBS12Q6ZW61 710 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ZNF366Q8N895 744 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 PTPRN2Q92932 1015 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 OSBPL8Q9BZF1 889 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 PRSS16Q9NQE7 514 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 IPO11Q9UI26 975 aaKnown RBP12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ZNF318Q5VUA4 2279 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ZSCAN5CA6NGD5 496 aaPredicted RBP12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 VAV1P15498 845 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 NUBP1P53384 320 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 ST8SIA6P61647 398 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 IL10RBQ08334 325 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 TFDP2Q14188 446 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 CYTH1Q15438 398 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 DLG2Q15700 870 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 C9orf64Q5T6V5 341 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 KAZNQ674X7 775 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 CCDC50Q8IVM0 306 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 HEMGNQ9BXL5 484 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 SUN2Q9UH99 717 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 HPCAL4Q9UM19 191 aa12.97□□□□□ -0.33
RPUSD4-208ENST00000533628 TARSL2A2RTX5 802 aaKnown RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 PECAM1P16284 738 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 HOXA6P31267 233 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 GARSP41250 739 aaKnown RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 DNA2P51530 1060 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 DYNLT1P63172 113 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 CCDC91Q7Z6B0 441 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 LRRC49Q8IUZ0 686 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 ATP11CQ8NB49 1132 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 CEP44Q9C0F1 390 aa12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.33
RPUSD4-208ENST00000533628 KIF5CO60282 957 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 SIN3BO75182 1162 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 EPHX1P07099 455 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 TGM2P21980 687 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 NNMTP40261 264 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 DGKEP52429 567 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 COPAP53621 1224 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 C22orf39Q6P5X5 142 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 RASSF3Q86WH2 238 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 MNS1Q8NEH6 495 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 FATE1Q969F0 183 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 ISG20Q96AZ6 181 aaKnown RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 CARD9Q9H257 536 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 CACNA1IQ9P0X4 2223 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 EDDM13A0A1B0GTR0 161 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 ENC1O14682 589 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 LAMTOR5O43504 91 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 TMCC1O94876 653 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 NR2C2P49116 596 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 ZNF354CQ86Y25 554 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 CAMKK1Q8N5S9 505 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 LRRN4Q8WUT4 740 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 MAML1Q92585 1016 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 NELL1Q92832 810 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 ZNF599Q96NL3 588 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 HHIPQ96QV1 700 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 FAM129BQ96TA1 746 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 LHX3Q9UBR4 397 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 UBA2Q9UBT2 640 aaPredicted RBP12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 SLC8A2Q9UPR5 921 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
RPUSD4-208ENST00000533628 TCRBV7S2A1N4TA0A589 114 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 FANCGO15287 622 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 ATP1A1P05023 1023 aaKnown RBP12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 IVLP07476 585 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 GABRG2P18507 467 aa12.94□□□□□ -0.34
RPUSD4-208ENST00000533628 MX2P20592 715 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms