RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZNF821O75541 412 aaPredicted RBP30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 CER1O95813 267 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 EPHB2P29323 1055 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 RECQLP46063 649 aaPredicted RBP30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 AGBL4Q5VU57 503 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 PCDH20Q8N6Y1 951 aaKnown RBP30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 CHST14Q8NCH0 376 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 CPLX3Q8WVH0 158 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 ZNF653Q96CK0 615 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 TRIM11Q96F44 468 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 EPAS1Q99814 870 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 ISCUQ9H1K1 167 aa30.92■■■□□ 2.54
SSSCA1-207ENST00000533115 CREB3O43889 395 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 CD160O95971 181 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 PRNPP04156 253 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 MYBL1P10243 752 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 RACK1P63244 317 aaKnown RBP30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 POLD3Q15054 466 aaPredicted RBP30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 HLA-BQ31612 363 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 DPY19L3Q6ZPD9 716 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 RTL3Q8N8U3 475 aaKnown RBP30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 IL21RQ9HBE5 538 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 IL36AQ9UHA7 158 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 HPCAL4Q9UM19 191 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 ANKRD6Q9Y2G4 727 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 FCF1Q9Y324 198 aaKnown RBP30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 SCINQ9Y6U3 715 aa30.91■■■□□ 2.54
SSSCA1-207ENST00000533115 KPNA3O00505 521 aaPredicted RBP30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 ZNF252P-AS1Q0IIN9 211 aa30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 KIF19Q2TAC6 998 aa30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 FNIP1Q8TF40 1166 aa30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 SLC6A18Q96N87 628 aa30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 LUC7L2Q9Y383 392 aaKnown RBP30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 SNX11Q9Y5W9 270 aa30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 ACTL7AQ9Y615 435 aa30.9■■■□□ 2.54
SSSCA1-207ENST00000533115 PLXNA2O75051 1894 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 SERPING1P05155 500 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 GEMIN4P57678 1058 aaKnown RBP30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 PPP2CBP62714 309 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 PPP2CAP67775 309 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 ARSIQ5FYB1 569 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 LAYNQ6UX15 382 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 ADAT2Q7Z6V5 191 aaKnown RBP30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 ARFGAP1Q8N6T3 406 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 TRIM7Q9C029 511 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 CATSPERBQ9H7T0 1116 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 MYO1AQ9UBC5 1043 aa30.89■■■□□ 2.54
SSSCA1-207ENST00000533115 WASH4PA8MWX3 477 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 LATO43561 262 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 RNF8O76064 485 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 GYPCP04921 128 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 ZNF883P0CG24 379 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 PMLP29590 882 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 DNA2P51530 1060 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 CCDC15Q0P6D6 951 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 CARD16Q5EG05 197 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 VPS36Q86VN1 386 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 GRIN3AQ8TCU5 1115 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 ISG20Q96AZ6 181 aaKnown RBP30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 ARRDC3Q96B67 414 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 XPO4Q9C0E2 1151 aaKnown RBP30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 NOL6Q9H6R4 1146 aaKnown RBP30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 MRPL47Q9HD33 250 aaKnown RBP30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 DYRK4Q9NR20 520 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 AP4E1Q9UPM8 1137 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 WASF2Q9Y6W5 498 aa30.88■■■□□ 2.53
SSSCA1-207ENST00000533115 KNL1Q8NG31 2342 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 PCNX2A6NKB5 2137 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 RNF103O00237 685 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 KDELR3O43731 214 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 TPM3P06753 285 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 HTR7P34969 479 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 PIP5KL1Q5T9C9 394 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 HEPHQ9BQS7 1158 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 TM7SF3Q9NS93 570 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 GPATCH2LQ9NWQ4 482 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 PCSK1NQ9UHG2 260 aa30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 FNDC3AQ9Y2H6 1198 aaKnown RBP30.87■■■□□ 2.53
SSSCA1-207ENST00000533115 VILLO15195 856 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 FGF10O15520 208 aaPredicted RBP30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 SH3BP5O60239 455 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 LEFTY1O75610 366 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 TAS2R38P59533 333 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 KCNT1Q5JUK3 1230 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 ERMARDQ5T6L9 678 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 PRPF39Q86UA1 669 aaKnown RBP30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 TRIM69Q86WT6 500 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 ZNF354CQ86Y25 554 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 PLPP6Q8IY26 295 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 PPP1R16AQ96I34 528 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 SERAC1Q96JX3 654 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 PREBQ9HCU5 417 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 AASDHPPTQ9NRN7 309 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 ARHGAP20Q9P2F6 1191 aa30.86■■■□□ 2.53
SSSCA1-207ENST00000533115 EIF3CLB5ME19 914 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 CTSKP43235 329 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 CCNHP51946 323 aaPredicted RBP30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 C21orf59P57076 290 aa30.85■■■□□ 2.53
SSSCA1-207ENST00000533115 YBEYP58557 167 aaPredicted RBP30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms