RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GNA14O95837 355 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 CALCAP01258 141 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
CMTM1-216ENST00000533078 NEK3P51956 506 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 SGCGQ13326 291 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 NR0B2Q15466 257 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 CDKN3Q16667 212 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 ZNF542PQ5EBM4 170 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 ACBD5Q5T8D3 534 aaPredicted RBP11.82□□□□□ -0.52
CMTM1-216ENST00000533078 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 ENOSF1Q7L5Y1 443 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
CMTM1-216ENST00000533078 PRICKLE2Q7Z3G6 844 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 DEFB106AQ8N104 65 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 ZNF548Q8NEK5 533 aaPredicted RBP11.82□□□□□ -0.52
CMTM1-216ENST00000533078 GRIN3AQ8TCU5 1115 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
CMTM1-216ENST00000533078 NAT6Q93015 286 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 DHTKD1Q96HY7 919 aaPredicted RBP11.82□□□□□ -0.52
CMTM1-216ENST00000533078 FEM1CQ96JP0 617 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 HDAC8Q9BY41 377 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 SLC17A9Q9BYT1 436 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 SIK2Q9H0K1 926 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 TMEM51Q9NW97 253 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 ASNSD1Q9NWL6 643 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 TBC1D30Q9Y2I9 924 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 TRPM6Q9BX84 2022 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 BOD1L1Q8NFC6 3051 aa11.82□□□□□ -0.52
CMTM1-216ENST00000533078 NAV2Q8IVL1 2488 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 BICDL2A1A5D9 508 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 K7ENP7 123 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 NEMP1O14524 444 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 AQP9O43315 295 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 NEBLO76041 1014 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 AFPP02771 609 aaKnown RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 CSF2P04141 144 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 NME1P15531 152 aaKnown RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 JUNDP17535 347 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 RRM1P23921 792 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 USP8P40818 1118 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 PMS1P54277 932 aaKnown RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 ZSCAN23Q3MJ62 389 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SEL1L3Q68CR1 1132 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 RETSATQ6NUM9 610 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 INO80CQ6PI98 192 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 GCNT7Q6ZNI0 430 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SETD3Q86TU7 594 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 ARHGEF19Q8IW93 802 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SLC22A18ASQ8N1D0 253 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 DCAF4L2Q8NA75 395 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 OR2A12Q8NGT7 310 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 WDR36Q8NI36 951 aaKnown RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 LMX1AQ8TE12 382 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 ZNF606Q8WXB4 792 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 ALG14Q96F25 216 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 ATXN7L3BQ96GX2 97 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 PPP1R13BQ96KQ4 1090 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SLC46A1Q96NT5 459 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SYNDIG1Q9H7V2 258 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-216ENST00000533078 RRN3Q9NYV6 651 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SPASTQ9UBP0 616 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 VPS51Q9UID3 782 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SALL4Q9UJQ4 1053 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 HS3ST4Q9Y661 456 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SPTA1P02549 2419 aa11.81□□□□□ -0.52
CMTM1-216ENST00000533078 SPTY2D1-AS1A0A0U1RR47 76 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 M0QYT0 321 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 TPP1O14773 563 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ARHGAP6O43182 974 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 LZTS3O60299 673 aaPredicted RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 PAGE1O75459 146 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 LEFTY1O75610 366 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 GRAP2O75791 330 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 WISP1O95388 367 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ADCY5O95622 1261 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 FGFR1OPO95684 399 aaKnown RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 PAK4O96013 591 aaPredicted RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 CTSLP07711 333 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 MYF5P13349 255 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ADRB3P13945 408 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 TGM2P21980 687 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 NOS2P35228 1153 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 DNA2P51530 1060 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 THOP1P52888 689 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 PITX1P78337 314 aaPredicted RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 EIF4EBP2Q13542 120 aaPredicted RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 PDE1CQ14123 709 aaPredicted RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 SPIDRQ14159 915 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 PTK2BQ14289 1009 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 TAF5Q15542 800 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 TMEM259Q4ZIN3 620 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 BRMS1LQ5PSV4 323 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 KLHL10Q6JEL2 608 aa11.8□□□□□ -0.52
CMTM1-216ENST00000533078 ESRP1Q6NXG1 681 aaKnown RBP11.8□□□□□ -0.52
CMTM1-216ENST00000533078 GUSBP11Q6P575 273 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms