RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 BAG1Q99933 345 aaPredicted RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 ACE2Q9BYF1 805 aaPredicted RBP17.01■□□□□ 0.31
PKP3-209ENST00000533069 SLC32A1Q9H598 525 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 TM9SF3Q9HD45 589 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 SARDHQ9UL12 918 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 FZD10Q9ULW2 581 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 NCOR2Q9Y618 2525 aa17.01■□□□□ 0.31
PKP3-209ENST00000533069 PCDH15Q96QU1 1955 aa17■□□□□ 0.31
PKP3-209ENST00000533069 A0A1W2PPC4 97 aa17■□□□□ 0.31
PKP3-209ENST00000533069 TMEM191CA6NGB0 347 aa17■□□□□ 0.31
PKP3-209ENST00000533069 ATMINO43313 823 aaPredicted RBP17■□□□□ 0.31
PKP3-209ENST00000533069 SMAD6O43541 496 aaKnown RBP17■□□□□ 0.31
PKP3-209ENST00000533069 CER1O95813 267 aa17■□□□□ 0.31
PKP3-209ENST00000533069 PRNPP04156 253 aa17■□□□□ 0.31
PKP3-209ENST00000533069 SERPING1P05155 500 aa17■□□□□ 0.31
PKP3-209ENST00000533069 SKILP12757 684 aa17■□□□□ 0.31
PKP3-209ENST00000533069 GLDCP23378 1020 aa17■□□□□ 0.31
PKP3-209ENST00000533069 EPHB2P29323 1055 aa17■□□□□ 0.31
PKP3-209ENST00000533069 CHRNA3P32297 505 aa17■□□□□ 0.31
PKP3-209ENST00000533069 ARF5P84085 180 aa17■□□□□ 0.31
PKP3-209ENST00000533069 OGDHQ02218 1023 aa17■□□□□ 0.31
PKP3-209ENST00000533069 HGSNATQ68CP4 663 aa17■□□□□ 0.31
PKP3-209ENST00000533069 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17■□□□□ 0.31
PKP3-209ENST00000533069 CCDC170Q8IYT3 715 aa17■□□□□ 0.31
PKP3-209ENST00000533069 RTL3Q8N8U3 475 aaKnown RBP17■□□□□ 0.31
PKP3-209ENST00000533069 ZNF653Q96CK0 615 aa17■□□□□ 0.31
PKP3-209ENST00000533069 NCAPGQ9BPX3 1015 aa17■□□□□ 0.31
PKP3-209ENST00000533069 ISCUQ9H1K1 167 aa17■□□□□ 0.31
PKP3-209ENST00000533069 CATSPERBQ9H7T0 1116 aa17■□□□□ 0.31
PKP3-209ENST00000533069 MRPL47Q9HD33 250 aaKnown RBP17■□□□□ 0.31
PKP3-209ENST00000533069 DONSONQ9NYP3 566 aa17■□□□□ 0.31
PKP3-209ENST00000533069 CNOT8Q9UFF9 292 aaKnown RBP17■□□□□ 0.31
PKP3-209ENST00000533069 DNAI1Q9UI46 699 aa17■□□□□ 0.31
PKP3-209ENST00000533069 HPCAL4Q9UM19 191 aa17■□□□□ 0.31
PKP3-209ENST00000533069 SSU72P8A0A1W2PR75 194 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 ZSCAN5CA6NGD5 496 aaPredicted RBP16.99■□□□□ 0.31
PKP3-209ENST00000533069 FGF10O15520 208 aaPredicted RBP16.99■□□□□ 0.31
PKP3-209ENST00000533069 ARHGAP6O43182 974 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 PLRG1O43660 514 aaKnown RBP16.99■□□□□ 0.31
PKP3-209ENST00000533069 GJB3O75712 270 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 ZNF883P0CG24 379 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 NUDT1P36639 197 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 RACK1P63244 317 aaKnown RBP16.99■□□□□ 0.31
PKP3-209ENST00000533069 CNTN1Q12860 1018 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 POLD3Q15054 466 aaPredicted RBP16.99■□□□□ 0.31
PKP3-209ENST00000533069 PIP4P1Q86T03 277 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 PYROXD2Q8N2H3 581 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 ISG20Q96AZ6 181 aaKnown RBP16.99■□□□□ 0.31
PKP3-209ENST00000533069 PPP1R16AQ96I34 528 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 ORAI3Q9BRQ5 295 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 MAGEB5Q9BZ81 275 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 DYRK4Q9NR20 520 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 NDFIP2Q9NV92 336 aa16.99■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3DA0A087WVF3 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3IA0A087WXS9 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3EA0A087X179 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3KA0A087X1G2 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 A0A1B0GVT2 93 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3FA6NER0 549 aaPredicted RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 WASH4PA8MWX3 477 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3LB9A6J9 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 LATO43561 262 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 CREB3O43889 395 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 RNF8O76064 485 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 CTSLP07711 333 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3HP0C7X1 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 ACVRL1P37023 503 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 CSNK1EP49674 416 aaKnown RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 METAP1P53582 386 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 YBEYP58557 167 aaPredicted RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 BNC1Q01954 994 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 HNRNPDQ14103 355 aaKnown RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 N4BP2L1Q5TBK1 243 aaPredicted RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 AGBL4Q5VU57 503 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3GQ6DHY5 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3CQ6IPX1 549 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 ADAT2Q7Z6V5 191 aaKnown RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 TBC1D3Q8IZP1 549 aaPredicted RBP16.98■□□□□ 0.31
PKP3-209ENST00000533069 TXLNBQ8N3L3 684 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 DEFB124Q8NES8 71 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 OR2I1PQ8NGU4 316 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 SKA1Q96BD8 255 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.98■□□□□ 0.31
PKP3-209ENST00000533069 TNKS2Q9H2K2 1166 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 PREBQ9HCU5 417 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 IL36AQ9UHA7 158 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 SLCO1B1Q9Y6L6 691 aa16.98■□□□□ 0.31
PKP3-209ENST00000533069 KPNA3O00505 521 aaPredicted RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 PRPSAP2O60256 369 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 ZNF821O75541 412 aaPredicted RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 IPO7O95373 1038 aaKnown RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 CD59P13987 128 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 CYLC1P35663 651 aaPredicted RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 ZNF135P52742 658 aaPredicted RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 TPI1P60174 286 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 ZNF252P-AS1Q0IIN9 211 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
PKP3-209ENST00000533069 HLA-BQ31612 363 aa16.97■□□□□ 0.31
PKP3-209ENST00000533069 PARP15Q460N3 678 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms