RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SETD7Q8WTS6 366 aaKnown RBP18.2■□□□□ 0.5
SMG1-203ENST00000532700 KLK6Q92876 244 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 SELENOOQ9BVL4 669 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 ACE2Q9BYF1 805 aaPredicted RBP18.2■□□□□ 0.5
SMG1-203ENST00000532700 TRIM7Q9C029 511 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 ATP13A1Q9HD20 1204 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 PPARGC1AQ9UBK2 798 aaKnown RBP18.2■□□□□ 0.5
SMG1-203ENST00000532700 PAXBP1Q9Y5B6 917 aa18.2■□□□□ 0.5
SMG1-203ENST00000532700 SIGLEC16A6NMB1 481 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 TMCO5BA8MYB1 307 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 VILLO15195 856 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 ALOX15BO15296 676 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 PLEKP08567 350 aaPredicted RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 ATXN1LP0C7T5 689 aaKnown RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 SERPINH1P50454 418 aaKnown RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 KRT83P78385 493 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 NRG1Q02297 640 aaPredicted RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 TEAD4Q15561 434 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 RWDD4Q6NW29 188 aaKnown RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 UNQ6494/PRO21346Q6UXR6 183 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 RAB44Q7Z6P3 723 aaPredicted RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 SPATS2Q86XZ4 545 aaKnown RBP18.19■□□□□ 0.5
SMG1-203ENST00000532700 ARFGAP1Q8N6T3 406 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 SERAC1Q96JX3 654 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 MYOCQ99972 504 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 OSBPL2Q9H1P3 480 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 AASDHPPTQ9NRN7 309 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 GPATCH2LQ9NWQ4 482 aa18.19■□□□□ 0.5
SMG1-203ENST00000532700 KPNA3O00505 521 aaPredicted RBP18.18■□□□□ 0.5
SMG1-203ENST00000532700 CALB1P05937 261 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 PRLRP16471 622 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 FERP16591 822 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 ARSIQ5FYB1 569 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 ACAD10Q6JQN1 1059 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 DNAJC24Q6P3W2 148 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 KDM7AQ6ZMT4 941 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 ZNF571Q7Z3V5 609 aaPredicted RBP18.18■□□□□ 0.5
SMG1-203ENST00000532700 OR6K2Q8NGY2 324 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 ARHGEF2Q92974 986 aaKnown RBP18.18■□□□□ 0.5
SMG1-203ENST00000532700 FZD3Q9NPG1 666 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 TMEM248Q9NWD8 314 aa18.18■□□□□ 0.5
SMG1-203ENST00000532700 ZFR2Q9UPR6 939 aaKnown RBP18.18■□□□□ 0.5
SMG1-203ENST00000532700 COL5A1P20908 1838 aaPredicted RBP18.17■□□□□ 0.5
SMG1-203ENST00000532700 A0A1B0GTH6 734 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 A0A1B0GTQ1 180 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 LEFTY1O75610 366 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 RHOQP17081 205 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 CD38P28907 300 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 ZNF143P52747 638 aaPredicted RBP18.17■□□□□ 0.5
SMG1-203ENST00000532700 SCAPQ12770 1279 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 CA9Q16790 459 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 SEL1L3Q68CR1 1132 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 ZNF783Q6ZMS7 281 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
SMG1-203ENST00000532700 DSG4Q86SJ6 1040 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 NTAN1Q96AB6 310 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 PEBP4Q96S96 227 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 PPP1R9BQ96SB3 815 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 TM6SF2Q9BZW4 377 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 PCDHGB2Q9Y5G2 931 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 CABIN1Q9Y6J0 2220 aa18.17■□□□□ 0.5
SMG1-203ENST00000532700 C1QTNF3-AMACRE9PGA6 284 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 SPINT1O43278 529 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 RNGTTO60942 597 aaKnown RBP18.16■□□□□ 0.5
SMG1-203ENST00000532700 SKILP12757 684 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 CCT8P50990 548 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 CCNHP51946 323 aaPredicted RBP18.16■□□□□ 0.5
SMG1-203ENST00000532700 NXPH1P58417 271 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 FILIP1LQ4L180 1135 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 FAM46CQ5VWP2 391 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 NAPEPLDQ6IQ20 393 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 SCYL2Q6P3W7 929 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 CYP4V2Q6ZWL3 525 aaPredicted RBP18.16■□□□□ 0.5
SMG1-203ENST00000532700 GLRX5Q86SX6 157 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 LUZP1Q86V48 1076 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 TMIEQ8NEW7 156 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 RHBDD1Q8TEB9 315 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 TBC1D31Q96DN5 1066 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 HAUS4Q9H6D7 363 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 CBX8Q9HC52 389 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 IL36AQ9UHA7 158 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 GGT7Q9UJ14 662 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 FZD10Q9ULW2 581 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 PCDHB9Q9Y5E1 797 aa18.16■□□□□ 0.5
SMG1-203ENST00000532700 IGF2RP11717 2491 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 A0A1W2PQU0 124 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 GOLGA8CPA6NN73 597 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 GOLGA6L19H0YKK7 550 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 DDX3XO00571 662 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMG1-203ENST00000532700 FLRT2O43155 660 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 SLC7A4O43246 635 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 DKK1O94907 266 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 PROS1P07225 676 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 DNA2P51530 1060 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 CLCN6P51797 869 aa18.15■□□□□ 0.5
SMG1-203ENST00000532700 CLDN6P56747 220 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms