RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ZNF599Q96NL3 588 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 TSGA13Q96PP4 275 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 FAM129BQ96TA1 746 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 KCND1Q9NSA2 647 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 ZSCAN32Q9NX65 697 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 DTLQ9NZJ0 730 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 PCDHGA2Q9Y5H1 932 aa14.75□□□□□ -0.05
CPSF1-206ENST00000531480 DMDP11532 3685 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 J3KR12 359 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 MCF2LO15068 1137 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 FTCDO95954 541 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 IGLV3-19P01714 112 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 TNNT1P13805 278 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 VAV1P15498 845 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 GARSP41250 739 aaKnown RBP14.74□□□□□ -0.05
CPSF1-206ENST00000531480 GBE1Q04446 702 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ZBTB16Q05516 673 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ZNF33AQ06730 810 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ADCY2Q08462 1091 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ELAVL3Q14576 367 aaKnown RBP14.74□□□□□ -0.05
CPSF1-206ENST00000531480 RFTN1Q14699 578 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ZFYVE27Q5T4F4 411 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 DCAF12L1Q5VU92 463 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ARHGAP36Q6ZRI8 547 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ATP11CQ8NB49 1132 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 OR2A12Q8NGT7 310 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 OLFM3Q96PB7 478 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 IRF2BPLQ9H1B7 796 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 MTG2Q9H4K7 406 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 USP36Q9P275 1121 aaKnown RBP14.74□□□□□ -0.05
CPSF1-206ENST00000531480 IPO11Q9UI26 975 aaKnown RBP14.74□□□□□ -0.05
CPSF1-206ENST00000531480 ACTL7AQ9Y615 435 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 MYO15AQ9UKN7 3530 aa14.74□□□□□ -0.05
CPSF1-206ENST00000531480 DFFAO00273 331 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 APOL1O14791 398 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 AXIN1O15169 862 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 GFRA3O60609 400 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 GSRP00390 522 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 PYGMP11217 842 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 CNR2P34972 360 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 NR2C2P49116 596 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 TFDP2Q14188 446 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 ANO7Q6IWH7 933 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 Q6ZVU0 165 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 BBS12Q6ZW61 710 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 TMPRSS6Q8IU80 811 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 UBL4BQ8N7F7 174 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 NETO2Q8NC67 525 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 HMGB4Q8WW32 186 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 FAM131CQ96AQ9 280 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 HDAC11Q96DB2 347 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 ALS2CR12Q96Q35 445 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 UBA2Q9UBT2 640 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-206ENST00000531480 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
CPSF1-206ENST00000531480 PACSIN2Q9UNF0 486 aaPredicted RBP14.73□□□□□ -0.05
CPSF1-206ENST00000531480 SPAG17Q6Q759 2223 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 TMCC1O94876 653 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 KRT10P13645 584 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 MX2P20592 715 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 TGM2P21980 687 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 CCNCP24863 283 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 FNTBP49356 437 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 RPS14P62263 151 aaKnown RBP14.72□□□□□ -0.05
CPSF1-206ENST00000531480 PPIDQ08752 370 aaKnown RBP14.72□□□□□ -0.05
CPSF1-206ENST00000531480 CYTH1Q15438 398 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 MAP7D1Q3KQU3 841 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 ODF2Q5BJF6 829 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 TMCO4Q5TGY1 634 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 TEX26Q8N6G2 289 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 TMIEQ8NEW7 156 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 MAML1Q92585 1016 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 HERPUD2Q9BSE4 406 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 TLR10Q9BXR5 811 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 MAK16Q9BXY0 300 aaKnown RBP14.72□□□□□ -0.05
CPSF1-206ENST00000531480 ITM2CQ9NQX7 267 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 LHX3Q9UBR4 397 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 PPM1HQ9ULR3 514 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 SCML1Q9UN30 329 aa14.72□□□□□ -0.05
CPSF1-206ENST00000531480 FCF1Q9Y324 198 aaKnown RBP14.72□□□□□ -0.05
CPSF1-206ENST00000531480 C10orf142B7Z368 130 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 CST8O60676 142 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 P2RY2P41231 377 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 CSNK1DP48730 415 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 PXNP49023 591 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 NSUN2Q08J23 767 aaKnown RBP eCLIP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 KLF1Q13351 362 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 HNRNPDQ14103 355 aaKnown RBP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 ACCSLQ4AC99 568 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 CARD16Q5EG05 197 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 ZNF776Q68DI1 518 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 DPY19L3Q6ZPD9 716 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 RFX6Q8HWS3 928 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 STK40Q8N2I9 435 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 ATPAF2Q8N5M1 289 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 OR2AP1Q8NGE2 309 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 OR8D1Q8WZ84 308 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 SIPA1Q96FS4 1042 aa14.71□□□□□ -0.05
CPSF1-206ENST00000531480 ZNF419Q96HQ0 510 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-206ENST00000531480 CCDC114Q96M63 670 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms