RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 ARHGAP42A6NI28 874 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 J3KR12 359 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 DFFAO00273 331 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 MCF2LO15068 1137 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 ALOX15BO15296 676 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 BUB1O43683 1085 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 SPOPO43791 374 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 MFSD11O43934 449 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 NDUFS2O75306 463 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 TMCC1O94876 653 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 ADH1BP00325 375 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 IL1BP01584 269 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 CTSLP07711 333 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 RETP07949 1114 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 TNNT1P13805 278 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 IL4RP24394 825 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 SLC1A1P43005 524 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 PTGER3P43115 390 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 DHPSP49366 369 aaPredicted RBP12.1□□□□□ -0.47
LTBP3-219ENST00000530990 GEMIN4P57678 1058 aaKnown RBP12.1□□□□□ -0.47
LTBP3-219ENST00000530990 SLC20A2Q08357 652 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 PDK2Q15119 407 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 POM121L1PQ3SYA9 428 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 ZFYVE27Q5T4F4 411 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 NCBP2-AS2Q69YL0 99 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 C11orf63Q6NUN7 778 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 DPY19L3Q6ZPD9 716 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 LPCAT2Q7L5N7 544 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 DSG4Q86SJ6 1040 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 KIAA1328Q86T90 577 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 AADATQ8N5Z0 425 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
LTBP3-219ENST00000530990 KCTD6Q8NC69 237 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 PIP4K2CQ8TBX8 421 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 GRIN3AQ8TCU5 1115 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 FAF2Q96CS3 445 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 LOXL4Q96JB6 756 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 CCDC114Q96M63 670 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
LTBP3-219ENST00000530990 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 SCML1Q9UN30 329 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 DUSP10Q9Y6W6 482 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 ATXN2Q99700 1313 aaKnown RBP12.1□□□□□ -0.47
LTBP3-219ENST00000530990 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
LTBP3-219ENST00000530990 BTNL10A8MVZ5 291 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 C1QTNF3-AMACRE9PGA6 284 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 RNF103O00237 685 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 PLK4O00444 970 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 PJA2O43164 708 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 PRAMEF11O60813 436 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 KRT1P04264 644 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 C5AR1P21730 350 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 KDELR1P24390 212 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 OXTRP30559 389 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 CHRNA3P32297 505 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 SLC8A1P32418 973 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 ACSL1P33121 698 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 SERPINB6P35237 376 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 DRD3P35462 400 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 MPLP40238 635 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
LTBP3-219ENST00000530990 DNA2P51530 1060 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
LTBP3-219ENST00000530990 CREB5Q02930 508 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 SPEM2Q0P670 501 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 CCDC6Q16204 474 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 CARD16Q5EG05 197 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 USP30Q70CQ3 517 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 CYP2U1Q7Z449 544 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 SLC41A1Q8IVJ1 513 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 LZTR1Q8N653 840 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 OR6K2Q8NGY2 324 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 TPCN2Q8NHX9 752 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 PCDH19Q8TAB3 1148 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 GANCQ8TET4 914 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 ISG20Q96AZ6 181 aaKnown RBP12.09□□□□□ -0.47
LTBP3-219ENST00000530990 HSPA12BQ96MM6 686 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 GPR174Q9BXC1 333 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 ARRDC1-AS1Q9H2J1 176 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 SP110Q9HB58 689 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 PARD6AQ9NPB6 346 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 FBXL12Q9NXK8 326 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 UBA2Q9UBT2 640 aaPredicted RBP12.09□□□□□ -0.47
LTBP3-219ENST00000530990 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 PPM1HQ9ULR3 514 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
LTBP3-219ENST00000530990 ALG6Q9Y672 507 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 ADAMTS9Q9P2N4 1935 aa12.09□□□□□ -0.47
LTBP3-219ENST00000530990 FRYLO94915 3013 aa12.08□□□□□ -0.47
LTBP3-219ENST00000530990 DOCK9Q9BZ29 2069 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
LTBP3-219ENST00000530990 C3orf70A6NLC5 250 aaPredicted RBP12.08□□□□□ -0.48
LTBP3-219ENST00000530990 PSTPIP1O43586 416 aa12.08□□□□□ -0.48
LTBP3-219ENST00000530990 RNASEH2AO75792 299 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms