RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 BLMHQ13867 455 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 LPIN1Q14693 890 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 DLG2Q15700 870 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 RAPH1Q70E73 1250 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 C1orf74Q96LT6 269 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 SERPINB11Q96P15 392 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ACE2Q9BYF1 805 aaPredicted RBP17.48■□□□□ 0.39
BRCA2-204ENST00000530893 UBE2OQ9C0C9 1292 aaKnown RBP17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ILKAPQ9H0C8 392 aaPredicted RBP17.48■□□□□ 0.39
BRCA2-204ENST00000530893 NMRK1Q9NWW6 199 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 PCDHB8Q9UN66 801 aa17.48■□□□□ 0.39
BRCA2-204ENST00000530893 ADRA1AP35348 466 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 GRIK1P39086 918 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 USP10Q14694 798 aaKnown RBP17.47■□□□□ 0.39
BRCA2-204ENST00000530893 FAM26DQ5JW98 314 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 LIPMQ5VYY2 423 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 RIPOR1Q6ZS17 1223 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 ZNF781Q8N8C0 355 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 RTL3Q8N8U3 475 aaKnown RBP17.47■□□□□ 0.39
BRCA2-204ENST00000530893 SPATA22Q8NHS9 363 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 USP33Q8TEY7 942 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 FATE1Q969F0 183 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 C1QTNF1Q9BXJ1 281 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 SLC39A8Q9C0K1 460 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 DRC3Q9H069 523 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 TASP1Q9H6P5 420 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 COG4Q9H9E3 785 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 DONSONQ9NYP3 566 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 KCNU1A8MYU2 1149 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 FKBP6O75344 327 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 SNUPNO95149 360 aaKnown RBP17.47■□□□□ 0.39
BRCA2-204ENST00000530893 ASGR1P07306 291 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 AP2B1P63010 937 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 C1orf146Q5VVC0 180 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 DENND5AQ6IQ26 1287 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 RGMBQ6NW40 437 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 NAPRTQ6XQN6 538 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 ZNF598Q86UK7 904 aaKnown RBP17.47■□□□□ 0.39
BRCA2-204ENST00000530893 MYLK4Q86YV6 388 aaPredicted RBP17.47■□□□□ 0.39
BRCA2-204ENST00000530893 IPMKQ8NFU5 416 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 HASPINQ8TF76 798 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 TRIB2Q92519 343 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 CASP10Q92851 521 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 MIEF2Q96C03 454 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 PANX3Q96QZ0 392 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 TBC1D13Q9NVG8 400 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 MAGED2Q9UNF1 606 aaPredicted RBP17.47■□□□□ 0.39
BRCA2-204ENST00000530893 INPP5FQ9Y2H2 1132 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 RAP2CQ9Y3L5 183 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 TCAF1Q9Y4C2 921 aa17.47■□□□□ 0.39
BRCA2-204ENST00000530893 A0A088AWK7 358 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 E2F8A0AVK6 867 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 SLCO1B7G3V0H7 640 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 DDHD2O94830 711 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 MT-CYBP00156 380 aaPredicted RBP17.46■□□□□ 0.39
BRCA2-204ENST00000530893 AHSGP02765 367 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 SLC2A3P11169 496 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 CTGFP29279 349 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 ARCN1P48444 511 aaKnown RBP17.46■□□□□ 0.39
BRCA2-204ENST00000530893 NUMBP49757 651 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 SESN3P58005 492 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 ASPHQ12797 758 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 CRHR2Q13324 411 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 AAGABQ6PD74 315 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 SCD5Q86SK9 330 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 TDRD5Q8NAT2 981 aaKnown RBP17.46■□□□□ 0.39
BRCA2-204ENST00000530893 GABPB2Q8TAK5 448 aaPredicted RBP17.46■□□□□ 0.39
BRCA2-204ENST00000530893 GATA5Q9BWX5 397 aaPredicted RBP17.46■□□□□ 0.39
BRCA2-204ENST00000530893 FSD1LQ9BXM9 530 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 ACOT9Q9Y305 439 aa17.46■□□□□ 0.39
BRCA2-204ENST00000530893 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 E9PAM4 449 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 CCNT2O60583 730 aaKnown RBP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 SLC35E2BP0CK96 405 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 CRABP2P29373 138 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 GMPRP36959 345 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 TUBP50607 506 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 MLLT6P55198 1093 aaPredicted RBP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 FCGRTP55899 365 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 ARTNQ5T4W7 220 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 TMCO4Q5TGY1 634 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 RANBP10Q6VN20 620 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 TMEM151AQ8N4L1 468 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 ACTRT2Q8TDY3 377 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 STYXQ8WUJ0 223 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 NRG4Q8WWG1 115 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 SCG3Q8WXD2 468 aaKnown RBP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 FUBP3Q96I24 572 aaKnown RBP eCLIP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 FICDQ9BVA6 458 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 RBM22Q9NW64 420 aaKnown RBP eCLIP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 SFMBT1Q9UHJ3 866 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 TLR6Q9Y2C9 796 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 LRCH1Q9Y2L9 728 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 MATN2O00339 956 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 SLC22A2O15244 555 aa17.45■□□□□ 0.38
BRCA2-204ENST00000530893 NCF2P19878 526 aaPredicted RBP17.45■□□□□ 0.38
BRCA2-204ENST00000530893 ABCG1P45844 678 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms