RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 RASA4BC9J798 803 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 E7ESA3 106 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 RASA4O43374 803 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 TSPAN3O60637 253 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 RAMP2O60895 175 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 RNF40O75150 1001 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ARSAP15289 507 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 OR1E1P30953 314 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 MAPKAPK2P49137 400 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 BBS9Q3SYG4 887 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 RABGAP1LQ5R372 815 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 TIGD7Q6NT04 549 aaPredicted RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 TMEM25Q86YD3 366 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ANKMY2Q8IV38 441 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 MCUQ8NE86 351 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 IRF7Q92985 503 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ARL8AQ96BM9 186 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 HMCESQ96FZ2 354 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 TTC25Q96NG3 672 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 FRMD8Q9BZ67 464 aaPredicted RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 HPS4Q9NQG7 708 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ARHGAP42A6NI28 874 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 GOLGA8KD6RF30 607 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ARNTLO00327 626 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 MATN3O15232 486 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 NFATC1O95644 943 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 MYZAPP0CAP1 466 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 CCNB1P14635 433 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 CD68P34810 354 aaPredicted RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 SGSHP51688 502 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 RPS24P62847 133 aaKnown RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 IFI35P80217 286 aaPredicted RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 CBX1P83916 185 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 TNK2Q07912 1038 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 DHCR24Q15392 516 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 MPPE1Q53F39 396 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 LY6G5CQ5SRR4 150 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ITPRIPL1Q6GPH6 555 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 CAND1Q86VP6 1230 aaKnown RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 PDCD7Q8N8D1 485 aaKnown RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 USP33Q8TEY7 942 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 PYROXD1Q8WU10 500 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 ATP2A3Q93084 1043 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 TEKT5Q96M29 485 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 GBA3Q9H227 469 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 BRD9Q9H8M2 597 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 LRRC4CQ9HCJ2 640 aa14.68□□□□□ -0.06
TTC39A-216ENST00000530004 IPO11Q9UI26 975 aaKnown RBP14.68□□□□□ -0.06
TTC39A-216ENST00000530004 OTOL1A6NHN0 477 aaPredicted RBP14.67□□□□□ -0.06
TTC39A-216ENST00000530004 POLR3GO15318 223 aaPredicted RBP14.67□□□□□ -0.06
TTC39A-216ENST00000530004 AVILO75366 819 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 CYBBP04839 570 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 CYP17A1P05093 508 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 CDH4P55283 916 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 RUNX3Q13761 415 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 POLD3Q15054 466 aaPredicted RBP14.67□□□□□ -0.06
TTC39A-216ENST00000530004 KRT71Q3SY84 523 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 PARP15Q460N3 678 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 TTMPQ5BVD1 217 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 MPP7Q5T2T1 576 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 FYB2Q5VWT5 728 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 ZNF354CQ86Y25 554 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 HJURPQ8NCD3 748 aaPredicted RBP14.67□□□□□ -0.06
TTC39A-216ENST00000530004 FBXO36Q8NEA4 188 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 DDI1Q8WTU0 396 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 BHMTQ93088 406 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 WDR83Q9BRX9 315 aaKnown RBP14.67□□□□□ -0.06
TTC39A-216ENST00000530004 CENPHQ9H3R5 247 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 ECT2Q9H8V3 914 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 TMBIM4Q9HC24 238 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 EIF2B3Q9NR50 452 aaKnown RBP14.67□□□□□ -0.06
TTC39A-216ENST00000530004 GTSE1Q9NYZ3 720 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 MARK1Q9P0L2 795 aa14.67□□□□□ -0.06
TTC39A-216ENST00000530004 NUP205Q92621 2012 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 TYW5A2RUC4 315 aaKnown RBP14.66□□□□□ -0.06
TTC39A-216ENST00000530004 ADH1CP00326 375 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 PENKP01210 267 aaPredicted RBP14.66□□□□□ -0.06
TTC39A-216ENST00000530004 ABHD2P08910 425 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 NFKB1P19838 968 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 YBEYP58557 167 aaPredicted RBP14.66□□□□□ -0.06
TTC39A-216ENST00000530004 SARNPP82979 210 aaKnown RBP14.66□□□□□ -0.06
TTC39A-216ENST00000530004 CDK16Q00536 496 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 ANO4Q32M45 955 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 TTC39BQ5VTQ0 682 aaPredicted RBP14.66□□□□□ -0.06
TTC39A-216ENST00000530004 CAPN12Q6ZSI9 719 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 ZNF534Q76KX8 674 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 CPA6Q8N4T0 437 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 CNTD1Q8N815 330 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 GORASP1Q9BQQ3 440 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 BBS2Q9BXC9 721 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 RETREG1Q9H6L5 497 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 SP110Q9HB58 689 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 PLK2Q9NYY3 685 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 CHMP2BQ9UQN3 213 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 NYNRINQ9P2P1 1898 aaKnown RBP14.66□□□□□ -0.06
TTC39A-216ENST00000530004 DOCK4Q8N1I0 1966 aa14.66□□□□□ -0.06
TTC39A-216ENST00000530004 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms