RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ZNF3P17036 446 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 CFL1P23528 166 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 LMO1P25800 156 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 NFKBIAP25963 317 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 TMOD1P28289 359 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 TKTP29401 623 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 PRDX5P30044 214 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 HPDP32754 393 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 HSPA9P38646 679 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 UBA7P41226 1012 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 STAT6P42226 847 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 MTHFRP42898 656 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 HAAOP46952 286 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 KRTAP10-11P60412 298 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 UBE2HP62256 183 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 STK4Q13043 487 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ITGA9Q13797 1035 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 PDE1CQ14123 709 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 ZNF268Q14587 947 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 CNGA2Q16280 664 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 IMMTQ16891 758 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 ALFQ53S48 1182 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 CCNJQ5T5M9 372 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 DAB2IPQ5VWQ8 1189 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 WDR93Q6P2C0 686 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 NEK5Q6P3R8 708 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 C6orf89Q6UWU4 347 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ZNF600Q6ZNG1 722 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ZNF788Q6ZQV5 615 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 PTF1AQ7RTS3 328 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 PPP1R32Q7Z5V6 425 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 FAM228AQ86W67 206 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 FAM109AQ8N4B1 249 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ZNF713Q8N859 430 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 OR7G1Q8NGA0 311 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ENKURQ8TC29 256 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ATP8B4Q8TF62 1192 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 JDP2Q8WYK2 163 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 RFKQ969G6 155 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 HAUS1Q96CS2 278 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 RRP36Q96EU6 259 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 SLC39A13Q96H72 371 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 TNIP3Q96KP6 325 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ART5Q96L15 291 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 COG8Q96MW5 612 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 RPRD1AQ96P16 312 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 OLFM3Q96PB7 478 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 TSGA13Q96PP4 275 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 SECISBP2Q96T21 854 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 CDRT15Q96T59 188 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 SMOQ99835 787 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 SH3GL2Q99962 352 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 VRK1Q99986 396 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 GAL3ST1Q99999 423 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 CENPKQ9BS16 269 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 CENPOQ9BU64 300 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 NUP58Q9BVL2 599 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 TIPINQ9BVW5 301 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 MRPL9Q9BYD2 267 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 ASPSCR1Q9BZE9 553 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 AMBRA1Q9C0C7 1298 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.15□□□□□ -1.75
CTR9-205ENST00000529898 INTS2Q9H0H0 1204 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 ACAD9Q9H845 621 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 DBNDD1Q9H9R9 158 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 SCPEP1Q9HB40 452 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 IL17RBQ9NRM6 502 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 SAMSN1Q9NSI8 373 aaKnown RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 FAIMQ9NVQ4 179 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ASB6Q9NWX5 421 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 CFAP97Q9P2B7 532 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 TRIM10Q9UDY6 481 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 RIMKLBQ9ULI2 386 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 VANGL2Q9ULK5 521 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 PNMA8BQ9ULN7 279 aaPredicted RBP4.15□□□□□ -1.75
CTR9-205ENST00000529898 FANCAO15360 1455 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 MED14O60244 1454 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 AOX1Q06278 1338 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 MYO3BQ8WXR4 1341 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 ADGRA2Q96PE1 1338 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 LRRC7Q96NW7 1537 aa4.15□□□□□ -1.75
CTR9-205ENST00000529898 CD109Q6YHK3 1445 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 NSD3Q9BZ95 1437 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 C17orf113A0A1B0GUU1 675 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 PVALEFA0A1B0GWK0 134 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 DPPA5A6NC42 116 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 CCDC169A6NNP5 214 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 BECN2A8MW95 431 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 LACTBL1A8MY62 500 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 RASA4BC9J798 803 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 H3BQV1 296 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 HIP1O00291 1037 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 APOL1O14791 398 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 XPO1O14980 1071 aaKnown RBP4.14□□□□□ -1.75
CTR9-205ENST00000529898 FYB1O15117 783 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 RNF113AO15541 343 aaKnown RBP4.14□□□□□ -1.75
CTR9-205ENST00000529898 SUPT3HO75486 399 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 SERPINB7O75635 380 aa4.14□□□□□ -1.75
CTR9-205ENST00000529898 DDHD2O94830 711 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms