RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 FSTL4Q6MZW2 842 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 DNAJC24Q6P3W2 148 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 ALKBH5Q6P6C2 394 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 TREML4Q6UXN2 200 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 STRADAQ7RTN6 431 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 C12orf40Q86WS4 652 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 SPATS2Q86XZ4 545 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 DCLK2Q8N568 766 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 ATP6V0D2Q8N8Y2 350 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 EZH1Q92800 747 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 ZNF669Q96BR6 464 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 C1orf74Q96LT6 269 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 XPO6Q96QU8 1125 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 SPSB2Q99619 263 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 DDX50Q9BQ39 737 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 CAPS2Q9BXY5 557 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 TKTL2Q9H0I9 626 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 FAM204AQ9H8W3 233 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 NHEJ1Q9H9Q4 299 aaPredicted RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 TMEM165Q9HC07 324 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 PIGVQ9NUD9 493 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 ARHGEF38Q9NXL2 777 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 PLK2Q9NYY3 685 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 COX16Q9P0S2 106 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 SEPT10Q9P0V9 454 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 DEC1Q9P2X7 70 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 CNOT8Q9UFF9 292 aaKnown RBP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 NENFQ9UMX5 172 aa6.46□□□□□ -1.38
ATPAF1-209ENST00000529214 KIF26AQ9ULI4 1882 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 COL4A2P08572 1712 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 HELZP42694 1942 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TMEM191CA6NGB0 347 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 I6L893 689 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TRIM24O15164 1050 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 AKR1B10O60218 316 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TSPAN3O60637 253 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 PAGE1O75459 146 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 B3GALNT1O75752 331 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 NEBLO76041 1014 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 KAT7O95251 611 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MOCS2O96007 188 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 EGFP01133 1207 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MYBL1P10243 752 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 GPD1P21695 349 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 CDC25BP30305 580 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 GRIA2P42262 883 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TNFRSF4P43489 277 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 PAPOLAP51003 745 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ZNF143P52747 638 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ATXN1P54253 815 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 GALCP54803 685 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ATP11AP98196 1134 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 GFPT1Q06210 699 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 CCDC173Q0VFZ6 552 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MESP2Q0VG99 397 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 LRRC32Q14392 662 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 GAS6Q14393 721 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 C15orf59Q2T9L4 293 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TTC31Q49AM3 519 aaPredicted RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 RAB6CQ53S08 254 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MS4A13Q5J8X5 152 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 RNF43Q68DV7 783 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 IRGCQ6NXR0 463 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ERAP2Q6P179 960 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 RFWD3Q6PCD5 774 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 DCUN1D2Q6PH85 259 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 DTWD2Q8NBA8 298 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 FAM76AQ8TAV0 307 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MIPOL1Q8TD10 442 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 DDI1Q8WTU0 396 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ANKRD49Q8WVL7 239 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 NELL1Q92832 810 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MYEOVQ96EZ4 313 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 CCDC42Q96M95 316 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 HAPLN3Q96S86 360 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 PRMT1Q99873 361 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 CNPY3Q9BT09 278 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 SLC2A11Q9BYW1 496 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 RAB6CQ9H0N0 254 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 THAP2Q9H0W7 228 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 MRPL47Q9HD33 250 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ANLNQ9NQW6 1124 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 AASDHPPTQ9NRN7 309 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 RBM12Q9NTZ6 932 aaKnown RBP6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 ZNF69Q9UC07 566 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 PPM1HQ9ULR3 514 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 CLEC4EQ9ULY5 219 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 SLC27A6Q9Y2P4 619 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 STARD13Q9Y3M8 1113 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TICRRQ7Z2Z1 1910 aa6.45□□□□□ -1.38
ATPAF1-209ENST00000529214 TBC1D3BA6NDS4 549 aa6.44□□□□□ -1.38
ATPAF1-209ENST00000529214 ANTXRLA6NF34 631 aa6.44□□□□□ -1.38
ATPAF1-209ENST00000529214 CHURC1-FNTBB4DL54 471 aa6.44□□□□□ -1.38
ATPAF1-209ENST00000529214 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
ATPAF1-209ENST00000529214 TBL1XO60907 577 aa6.44□□□□□ -1.38
ATPAF1-209ENST00000529214 RFPL3O75679 317 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms