RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 MAPK8P45983 427 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 ZNF177Q13360 481 aaPredicted RBP11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 LLGL1Q15334 1064 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 PMS2CLQ68D20 193 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 MFSD7Q6UXD7 560 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 CYP2U1Q7Z449 544 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 ANKS1BQ7Z6G8 1248 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 PIP4P1Q86T03 277 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 CCDC50Q8IVM0 306 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 KATNAL2Q8IYT4 538 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 SLC35F6Q8N357 371 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 RTL3Q8N8U3 475 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 NETO2Q8NC67 525 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 TRIM58Q8NG06 486 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 ZNF670Q9BS34 389 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 CCDC86Q9H6F5 360 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 ETNK2Q9NVF9 386 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 TMEM248Q9NWD8 314 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 DDX56Q9NY93 547 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 DNAI1Q9UI46 699 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 GGA2Q9UJY4 613 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 PI4KAP42356 2102 aa11.83□□□□□ -0.52
CCDC90B-210ENST00000528149 A0A1W2PQF6 199 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 CCDC66A2RUB6 948 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 FGF10O15520 208 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 KIF5CO60282 957 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 TRIM16O95361 564 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 PABPC1P11940 636 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ERCC2P18074 760 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 BCKDHBP21953 392 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 MZF1P28698 734 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 OR1E1P30953 314 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 HTR7P34969 479 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 EIF2DP41214 584 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 GRIA2P42262 883 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 FAM193AP78312 1265 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 AMPD2Q01433 879 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ZNF211Q13398 564 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 PDK2Q15119 407 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ODF2Q5BJF6 829 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ANKRD20A8PQ5CZ79 823 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ZNF569Q5MCW4 686 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 DCAF12L1Q5VU92 463 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 RNF219Q5W0B1 726 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ANO7Q6IWH7 933 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 AADACL2Q6P093 401 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 SPOCD1Q6ZMY3 1216 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 RAB44Q7Z6P3 723 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 CCDC117Q8IWD4 279 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 APCDD1Q8J025 514 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 CAMKK1Q8N5S9 505 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 NPWQ8N729 165 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 MDGA1Q8NFP4 955 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 OR7D4Q8NG98 312 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 MDM1Q8TC05 714 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 RLN3Q8WXF3 142 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 CRELD1Q96HD1 420 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 CELF6Q96J87 481 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 SLC2A11Q9BYW1 496 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 MUC3BQ9H195 1237 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 NOL6Q9H6R4 1146 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 CATSPERBQ9H7T0 1116 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 RCOR3Q9P2K3 495 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 ZKSCAN5Q9Y2L8 839 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 PCDHA3Q9Y5H8 950 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 PLXNB3Q9ULL4 1909 aa11.82□□□□□ -0.52
CCDC90B-210ENST00000528149 A0A0D9SEW6 157 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 MIF4GDA9UHW6 222 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 MFSD11O43934 449 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 ATG13O75143 517 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 IL4RP24394 825 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 IL12RB1P42701 662 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 CDKN2BP42772 138 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 HCAR3P49019 387 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 MAPKAPK2P49137 400 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 ZNF135P52742 658 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 RWDD2BP57060 319 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 PITRM1Q5JRX3 1037 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 MEI1Q5TIA1 1274 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 KAZNQ674X7 775 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 ADIPOR2Q86V24 386 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 MAP7D3Q8IWC1 876 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 PQLC3Q8N755 202 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 UBL4BQ8N7F7 174 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 EXD1Q8NHP7 514 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 PCDH19Q8TAB3 1148 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 FAF2Q96CS3 445 aa11.81□□□□□ -0.52
CCDC90B-210ENST00000528149 HES6Q96HZ4 224 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms