RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CYP3A43Q9HB55 503 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 UTP6Q9NYH9 597 aaKnown RBP4.35□□□□□ -1.71
CD44-226ENST00000527889 CLIC5Q9NZA1 410 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 SMARCAL1Q9NZC9 954 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
CD44-226ENST00000527889 EHD2Q9NZN4 543 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 CTTNBP2NLQ9P2B4 639 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 BARX2Q9UMQ3 279 aaPredicted RBP4.35□□□□□ -1.71
CD44-226ENST00000527889 L1RE1Q9UN81 338 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 COG5Q9UP83 839 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 POLHQ9Y253 713 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 ATP11BQ9Y2G3 1177 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 COA3Q9Y2R0 106 aaPredicted RBP4.35□□□□□ -1.71
CD44-226ENST00000527889 HYOU1Q9Y4L1 999 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 ATP8B3O60423 1300 aa4.35□□□□□ -1.71
CD44-226ENST00000527889 NUMA1Q14980 2115 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 TPRP12270 2363 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 ASH1LQ9NR48 2969 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 WDFY4Q6ZS81 3184 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 A0A0A6YYK5 440 aaPredicted RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 A0A0U1RQF3 1178 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 A0A1W2PRQ8 180 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PRSS38A1L453 326 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 KPNA7A9QM74 516 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 F5H423 210 aaPredicted RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 F8W810 466 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 M0QYV0 167 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 KRIT1O00522 736 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PODXLO00592 558 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CYB561D2O14569 222 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ZNF185O15231 689 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 GSC2O15499 205 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 BUB1BO60566 1050 aaPredicted RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 SLU7O95391 586 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 CYP1A1P04798 512 aaPredicted RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 CYP1A2P05177 515 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 LPLP06858 475 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PAEPP09466 180 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 MTHFD2P13995 350 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ACAT1P24752 427 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 LMO2P25791 158 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 LRPAP1P30533 357 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CXCR5P32302 372 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 NSFP46459 744 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 BRCC3P46736 316 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CLCNKBP51801 687 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 SLC5A3P53794 718 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 EPHA5P54756 1037 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CCL23P55773 120 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 LILRA4P59901 499 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 GPC5P78333 572 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 EGR3Q06889 387 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 INCA1Q0VD86 236 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 SLMAPQ14BN4 828 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 E2F5Q15329 346 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 TOMM20Q15388 145 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CCDC142Q17RM4 750 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 SOWAHAQ2M3V2 549 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 MUM1Q2TAK8 710 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 GOLGA7BQ2TAP0 167 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ALFQ53S48 1182 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CLLU1OSQ5K130 101 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 MROH9Q5TGP6 573 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 DAB2IPQ5VWQ8 1189 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ARMC3Q5W041 872 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PAPD7Q5XG87 772 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 SLC39A5Q6ZMH5 540 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 TRIM72Q6ZMU5 477 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ESPNLQ6ZVH7 1005 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 MON1BQ7L1V2 547 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PEX26Q7Z412 305 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 DEFB128Q7Z7B8 93 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 DAAM2Q86T65 1068 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ACOT1Q86TX2 421 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 TTC30AQ86WT1 665 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ZNF677Q86XU0 584 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 ZNF354CQ86Y25 554 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CREG2Q8IUH2 290 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 NKAPQ8N5F7 415 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 CAMKK1Q8N5S9 505 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 RNF10Q8N5U6 811 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 LRRC52Q8N7C0 313 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PPM1NQ8N819 430 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 C12orf29Q8N999 325 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 LRRC57Q8N9N7 239 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 USP38Q8NB14 1042 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 DBF4BQ8NFT6 615 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 OR6B3Q8NGW1 331 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 UBA3Q8TBC4 463 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 POF1BQ8WVV4 589 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 KBTBD7Q8WVZ9 684 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 TBC1D31Q96DN5 1066 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 RAX2Q96IS3 184 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 PAWRQ96IZ0 340 aaKnown RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 SENP8Q96LD8 212 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CCDC138Q96M89 665 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 TBCBQ99426 244 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 CDX2Q99626 313 aaPredicted RBP4.34□□□□□ -1.71
CD44-226ENST00000527889 TLR10Q9BXR5 811 aa4.34□□□□□ -1.71
CD44-226ENST00000527889 WNT8AQ9H1J5 351 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms