RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PNPOQ9NVS9 261 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 TLR6Q9Y2C9 796 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 MSI1O43347 362 aaKnown RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 CPA2P48052 419 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 MLLT6P55198 1093 aaPredicted RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 PRKCZQ05513 592 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 KDSRQ06136 332 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 GRM3Q14832 879 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 SLC39A12Q504Y0 691 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 TNS4Q8IZW8 715 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 C8orf48Q96LL4 319 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 ZNF570Q96NI8 536 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 CAB39LQ9H9S4 337 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 NMUR1Q9HB89 426 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 BATF3Q9NR55 127 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 TBC1D13Q9NVG8 400 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 OXSMQ9NWU1 459 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 MAGED2Q9UNF1 606 aaPredicted RBP15.59■□□□□ 0.09
USH1C-207ENST00000527720 TCAF1Q9Y4C2 921 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 HS3ST4Q9Y661 456 aa15.59■□□□□ 0.09
USH1C-207ENST00000527720 VWA8A3KMH1 1905 aa15.58■□□□□ 0.09
USH1C-207ENST00000527720 A0A1W2PQH9 124 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 PSMG1O95456 288 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 MT-CYBP00156 380 aaPredicted RBP15.58■□□□□ 0.08
USH1C-207ENST00000527720 PAMP19021 973 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 CCND3P30281 292 aaPredicted RBP15.58■□□□□ 0.08
USH1C-207ENST00000527720 ARRB2P32121 409 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 PTDSS1P48651 473 aaKnown RBP15.58■□□□□ 0.08
USH1C-207ENST00000527720 IRF9Q00978 393 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 SLC12A1Q13621 1099 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 UBAP2LQ14157 1087 aaKnown RBP15.58■□□□□ 0.08
USH1C-207ENST00000527720 C6orf163Q5TEZ5 329 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 ATG14Q6ZNE5 492 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 SLC24A5Q71RS6 500 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 MAVSQ7Z434 540 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 SCUBE1Q8IWY4 988 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 NUP93Q8N1F7 819 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 IPMKQ8NFU5 416 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 STMN2Q93045 179 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 SLC39A13Q96H72 371 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 FICDQ9BVA6 458 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 PRKD2Q9BZL6 878 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 UBE2OQ9C0C9 1292 aaKnown RBP15.58■□□□□ 0.08
USH1C-207ENST00000527720 CDH19Q9H159 772 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 TRMT13Q9NUP7 481 aaKnown RBP15.58■□□□□ 0.08
USH1C-207ENST00000527720 RBM22Q9NW64 420 aaKnown RBP eCLIP15.58■□□□□ 0.08
USH1C-207ENST00000527720 SLC39A10Q9ULF5 831 aa15.58■□□□□ 0.08
USH1C-207ENST00000527720 H0Y3Z8 333 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 HSPA4LO95757 839 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 HLA-DQB2P05538 268 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 DLG2Q15700 870 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 TRMT5Q32P41 509 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 ZYG11AQ6WRX3 759 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 RAPH1Q70E73 1250 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 SCN4BQ8IWT1 228 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 STON2Q8WXE9 905 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 ZNF419Q96HQ0 510 aaPredicted RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 FAM161BQ96MY7 647 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 C1QTNF1Q9BXJ1 281 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 FSD1LQ9BXM9 530 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 TLL2Q9Y6L7 1015 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 GREB1Q4ZG55 1949 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 F8W810 466 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 CIB2O75838 187 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 NEBLO76041 1014 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 LUC7L3O95232 432 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 MAGEA11P43364 429 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 ARCN1P48444 511 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 PGFP49763 221 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 PAPOLAP51003 745 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 NDST2P52849 883 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 USP10Q14694 798 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 TAF11Q15544 211 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 NOMO2Q5JPE7 1267 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 METTL21CQ5VZV1 264 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 EPGNQ6UW88 154 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 RANBP10Q6VN20 620 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 COLGALT2Q8IYK4 626 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 UMODL1-AS1Q8N2C9 162 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 KCNV2Q8TDN2 545 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 ACE2Q9BYF1 805 aaPredicted RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 NDFIP2Q9NV92 336 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 OSER1Q9NX31 292 aa15.57■□□□□ 0.08
USH1C-207ENST00000527720 ABI2Q9NYB9 513 aaPredicted RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 STX18Q9P2W9 335 aaKnown RBP15.57■□□□□ 0.08
USH1C-207ENST00000527720 E2F8A0AVK6 867 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 DDHD2O94830 711 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 ALDH1A1P00352 501 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 AHSGP02765 367 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 PRDX6P30041 224 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 GMPRP36959 345 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 FAM189BP81408 668 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 MXRA7P84157 204 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 HNRNPDQ14103 355 aaKnown RBP15.56■□□□□ 0.08
USH1C-207ENST00000527720 POU6F1Q14863 301 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 CCDC6Q16204 474 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 FSCBQ5H9T9 825 aa15.56■□□□□ 0.08
USH1C-207ENST00000527720 LIPMQ5VYY2 423 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms