RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 FCF1Q9Y324 198 aaKnown RBP16.59■□□□□ 0.25
BEST1-205ENST00000526988 ACTL7AQ9Y615 435 aa16.59■□□□□ 0.25
BEST1-205ENST00000526988 VILLO15195 856 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 PLRG1O43660 514 aaKnown RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 RAMP2O60895 175 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 FTLP02792 175 aaPredicted RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 PRNPP04156 253 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 PSMA2P25787 234 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 EPHB2P29323 1055 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 L1CAMP32004 1257 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 UBASH3AP57075 661 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 OGDHQ02218 1023 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 CCDC15Q0P6D6 951 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 SCAPQ12770 1279 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 HNRNPDQ14103 355 aaKnown RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 POLD3Q15054 466 aaPredicted RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 KCNT1Q5JUK3 1230 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 AGBL4Q5VU57 503 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 DPY19L3Q6ZPD9 716 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 TMC6Q7Z403 805 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 RYBPQ8N488 228 aaPredicted RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 TMIEQ8NEW7 156 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 CEP44Q9C0F1 390 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 MAGEH1Q9H213 219 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 IL36AQ9UHA7 158 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 TPX2Q9ULW0 747 aaKnown RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 FZD10Q9ULW2 581 aa16.58■□□□□ 0.24
BEST1-205ENST00000526988 ASCC3Q8N3C0 2202 aaKnown RBP16.58■□□□□ 0.24
BEST1-205ENST00000526988 H0Y8X5 98 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 DDX3XO00571 662 aaKnown RBP eCLIP16.57■□□□□ 0.24
BEST1-205ENST00000526988 WNT9AO14904 365 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 ZNF883P0CG24 379 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 SPINK2P20155 84 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 CD38P28907 300 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 PRKCIP41743 596 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 CTSKP43235 329 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 SHC2P98077 582 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 SUZ12Q15022 739 aaKnown RBP16.57■□□□□ 0.24
BEST1-205ENST00000526988 TRIP6Q15654 476 aaKnown RBP16.57■□□□□ 0.24
BEST1-205ENST00000526988 SLC45A4Q5BKX6 768 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 CARD16Q5EG05 197 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 PRAMEF14Q5SWL7 426 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 PCDH20Q8N6Y1 951 aaKnown RBP16.57■□□□□ 0.24
BEST1-205ENST00000526988 FAM131CQ96AQ9 280 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 ARRDC3Q96B67 414 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 EPAS1Q99814 870 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 TTYH3Q9C0H2 523 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 NEU3Q9UQ49 428 aa16.57■□□□□ 0.24
BEST1-205ENST00000526988 BUB1O43683 1085 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 RNGTTO60942 597 aaKnown RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 ZNF821O75541 412 aaPredicted RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 LEFTY1O75610 366 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 TOP3BO95985 862 aaKnown RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 WNT1P04628 370 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 GZMAP12544 262 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 GEMIN4P57678 1058 aaKnown RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 IL9RQ01113 521 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 TDRD12Q587J7 1177 aaKnown RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 FIGNQ5HY92 759 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 PIP5KL1Q5T9C9 394 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 RTL3Q8N8U3 475 aaKnown RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 ZNF653Q96CK0 615 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 HEPHQ9BQS7 1158 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.56■□□□□ 0.24
BEST1-205ENST00000526988 TM6SF2Q9BZW4 377 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 PREBQ9HCU5 417 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 GPATCH2LQ9NWQ4 482 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
BEST1-205ENST00000526988 PCSK1NQ9UHG2 260 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 PCOLCE2Q9UKZ9 415 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 PCDHGB2Q9Y5G2 931 aa16.56■□□□□ 0.24
BEST1-205ENST00000526988 C10orf142B7Z368 130 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 RNF103O00237 685 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 LATO43561 262 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 KDELR3O43731 214 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 CCT8P50990 548 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 CCNHP51946 323 aaPredicted RBP16.55■□□□□ 0.24
BEST1-205ENST00000526988 AIF1P55008 147 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 TAS2R38P59533 333 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 NAPEPLDQ6IQ20 393 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 ERN2Q76MJ5 926 aaKnown RBP16.55■□□□□ 0.24
BEST1-205ENST00000526988 TRIM69Q86WT6 500 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 OR6K2Q8NGY2 324 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 RHBDD1Q8TEB9 315 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 KLK6Q92876 244 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 PPP1R16AQ96I34 528 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 DHX35Q9H5Z1 703 aaKnown RBP16.55■□□□□ 0.24
BEST1-205ENST00000526988 ZDHHC6Q9H6R6 413 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 CATSPERBQ9H7T0 1116 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
BEST1-205ENST00000526988 A0A1W2PQJ5 194 aa16.54■□□□□ 0.24
BEST1-205ENST00000526988 A0A1W2PQU0 124 aa16.54■□□□□ 0.24
BEST1-205ENST00000526988 A0A1W2PR77 199 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms