RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 AGBL4Q5VU57 503 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 SFMBT2Q5VUG0 894 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 TMIEQ8NEW7 156 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 RHBDD1Q8TEB9 315 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 CNPY3Q9BT09 278 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 FUCA2Q9BTY2 467 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 SCNM1Q9BWG6 230 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 NDFIP2Q9NV92 336 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 HPCAL4Q9UM19 191 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 PCDHGB2Q9Y5G2 931 aa18.95■□□□□ 0.62
CAPN1-203ENST00000525013 AKAP13Q12802 2813 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 IGF2RP11717 2491 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 A0A1W2PQC6 194 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 TCRBV5S1A1TA0A578 114 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 WNT9AO14904 365 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 LATO43561 262 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 HYAL3O43820 417 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-203ENST00000525013 CCT8P50990 548 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 ARF5P84085 180 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 IL9RQ01113 521 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 CCDC15Q0P6D6 951 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 SCAPQ12770 1279 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 KLHL40Q2TBA0 621 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 SLC45A4Q5BKX6 768 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 PRAMEF14Q5SWL7 426 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 PPP1R2P3Q6NXS1 205 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 DPY19L3Q6ZPD9 716 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 NLRP14Q86W24 1093 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 PYROXD2Q8N2H3 581 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 FAM131CQ96AQ9 280 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 SYT11Q9BT88 431 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 CEP44Q9C0F1 390 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 HAUS4Q9H6D7 363 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 RETREG1Q9H6L5 497 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 TMEM248Q9NWD8 314 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 IL36AQ9UHA7 158 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 PCOLCE2Q9UKZ9 415 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 WASF3Q9UPY6 502 aa18.94■□□□□ 0.62
CAPN1-203ENST00000525013 FCF1Q9Y324 198 aaKnown RBP18.94■□□□□ 0.62
CAPN1-203ENST00000525013 USP24Q9UPU5 2620 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 C10orf142B7Z368 130 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 FLRT2O43155 660 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 CREB3O43889 395 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 RAMP2O60895 175 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 TRIM16O95361 564 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 WNT1P04628 370 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 POLD3Q15054 466 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-203ENST00000525013 ZNF423Q2M1K9 1284 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 PPP1R15BQ5SWA1 713 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 PIP5KL1Q5T9C9 394 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 LUZP1Q86V48 1076 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 ZNF354CQ86Y25 554 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 RYBPQ8N488 228 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-203ENST00000525013 PCDH20Q8N6Y1 951 aaKnown RBP18.93■□□□□ 0.62
CAPN1-203ENST00000525013 ARHGEF2Q92974 986 aaKnown RBP18.93■□□□□ 0.62
CAPN1-203ENST00000525013 ARRDC3Q96B67 414 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 VCPIP1Q96JH7 1222 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 MAGEH1Q9H213 219 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 CBX8Q9HC52 389 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 PREBQ9HCU5 417 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 PARVAQ9NVD7 372 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 ACTL7AQ9Y615 435 aa18.93■□□□□ 0.62
CAPN1-203ENST00000525013 GOLGA4Q13439 2230 aaKnown RBP18.92■□□□□ 0.62
CAPN1-203ENST00000525013 ATMINO43313 823 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-203ENST00000525013 DFNA5O60443 496 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 CBFA2T3O75081 653 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 ZNF821O75541 412 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-203ENST00000525013 LEFTY1O75610 366 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 FTH1P19P0C7X4 201 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 EPHB2P29323 1055 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 L1CAMP32004 1257 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 NUDT1P36639 197 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 GEMIN4P57678 1058 aaKnown RBP18.92■□□□□ 0.62
CAPN1-203ENST00000525013 TAS2R38P59533 333 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 KLHL30Q0D2K2 578 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 MAMLD1Q13495 774 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 NR1I3Q14994 352 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 ST3GAL2Q16842 350 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 SETMARQ53H47 684 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-203ENST00000525013 CARD16Q5EG05 197 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 NAPEPLDQ6IQ20 393 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 LEKR1Q6ZMV7 388 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 ZNF571Q7Z3V5 609 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-203ENST00000525013 TMC6Q7Z403 805 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 TRIM69Q86WT6 500 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 CHCHD4Q8N4Q1 142 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 PPP1R16AQ96I34 528 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 EPAS1Q99814 870 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 HEPHQ9BQS7 1158 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 TM6SF2Q9BZW4 377 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 AIPL1Q9NZN9 384 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 ARHGAP20Q9P2F6 1191 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 NEU3Q9UQ49 428 aa18.92■□□□□ 0.62
CAPN1-203ENST00000525013 A0A1W2PR77 199 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 TLR4O00206 839 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 RNF103O00237 685 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 RNGTTO60942 597 aaKnown RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 PCDH8O95206 1070 aa18.91■□□□□ 0.62
CAPN1-203ENST00000525013 FTLP02792 175 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-203ENST00000525013 SKILP12757 684 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms