RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PRMT8Q9NR22 394 aaPredicted RBP4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 DDX56Q9NY93 547 aaKnown RBP4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 DTLQ9NZJ0 730 aa4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 LHX3Q9UBR4 397 aa4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 UBA2Q9UBT2 640 aaPredicted RBP4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 EVLQ9UI08 416 aaPredicted RBP4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 HPCAL4Q9UM19 191 aa4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 R3HDM2Q9Y2K5 976 aaKnown RBP4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 TTLL3Q9Y4R7 772 aa4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 TRIOO75962 3097 aa4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 ATXN2Q99700 1313 aaKnown RBP4.69□□□□□ -1.66
CHMP4A-202ENST00000524955 MUC3AQ02505 3323 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 A0A0U1RQS6 177 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 EDDM13A0A1B0GTR0 161 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 A0A1W2PP55 124 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CCDC66A2RUB6 948 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 A8MX80 341 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 H7C0C1 242 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 KPNA3O00505 521 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 KCNK3O14649 394 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ZNF185O15231 689 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ATP9BO43861 1147 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CEP104O60308 925 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PRAMEF11O60813 436 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 LEFTY1O75610 366 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 RNASEH2AO75792 299 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ALDH1A2O94788 518 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 APBB3O95704 486 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PEX11BO96011 259 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 JCHAINP01591 159 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SRPRAP08240 638 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ACADMP11310 421 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 MAOBP27338 520 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CHRNA3P32297 505 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC8A1P32418 973 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ACSL1P33121 698 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 GARSP41250 739 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ATP5OP48047 213 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SCNN1BP51168 640 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CCNHP51946 323 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 NDST2P52849 883 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 TERF1P54274 439 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 YBEYP58557 167 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 GNG11P61952 73 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 DSC2Q02487 901 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ITKQ08881 620 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ZBTB17Q13105 803 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CAMK2GQ13555 558 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SNX1Q13596 522 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ENPP2Q13822 863 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 LBRQ14739 615 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PAFAH1B3Q15102 231 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 RPS6KA1Q15418 735 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CST6Q15828 149 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 HNRNPA1L2Q32P51 320 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PARP15Q460N3 678 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CARD16Q5EG05 197 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 TFDP3Q5H9I0 405 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ACBD5Q5T8D3 534 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 MEI1Q5TIA1 1274 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 LRRC38Q5VT99 294 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC9A4Q6AI14 798 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 RETSATQ6NUM9 610 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 KDM7AQ6ZMT4 941 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CEP68Q76N32 757 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 TRMT11Q7Z4G4 463 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PRUNE1Q86TP1 453 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 KBTBD6Q86V97 674 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 TMEFF1Q8IYR6 380 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 RCOR2Q8IZ40 523 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SYCE1Q8N0S2 351 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 TXLNBQ8N3L3 684 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 HDDC3Q8N4P3 179 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 AADATQ8N5Z0 425 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 UBL4BQ8N7F7 174 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ZNF557Q8N988 423 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 OR2T3Q8NH03 318 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 EXD1Q8NHP7 514 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PIP4K2CQ8TBX8 421 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 C1orf54Q8WWF1 131 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PRCCQ92733 491 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 P3H4Q92791 437 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 KLK6Q92876 244 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ARRDC3Q96B67 414 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 FAF2Q96CS3 445 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SIPA1Q96FS4 1042 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 HES6Q96HZ4 224 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 RBM41Q96IZ5 413 aaKnown RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 MS4A14Q96JA4 679 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ALS2CR12Q96Q35 445 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 WDR24Q96S15 920 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 CINPQ9BW66 212 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 TLR10Q9BXR5 811 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 OSBPL8Q9BZF1 889 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 NEUROG2Q9H2A3 272 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SMOC1Q9H4F8 434 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PDFQ9HBH1 243 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 NT5MQ9NPB1 228 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms