RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 SLC39A8Q9C0K1 460 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 LACRTQ9GZZ8 138 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 PPM1HQ9ULR3 514 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 FZD4Q9ULV1 537 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 CYP8B1Q9UNU6 501 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 CEP192Q8TEP8 1941 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 SDK1Q7Z5N4 2213 aa15.4■□□□□ 0.06
SF3B2-202ENST00000524475 PTPRZ1P23471 2315 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-202ENST00000524475 C1QTNF3-AMACRE9PGA6 284 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 SPOPO43791 374 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 GFRA3O60609 400 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 CD48P09326 243 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 AMPD1P23109 780 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 DPP6P42658 865 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 PAPOLAP51003 745 aaKnown RBP15.39■□□□□ 0.05
SF3B2-202ENST00000524475 KIF5AQ12840 1032 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 RFTN1Q14699 578 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-202ENST00000524475 IFI16Q16666 785 aaKnown RBP15.39■□□□□ 0.05
SF3B2-202ENST00000524475 ANKRD20A8PQ5CZ79 823 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 TMCO4Q5TGY1 634 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 LPCAT2Q7L5N7 544 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 MMAAQ8IVH4 418 aaKnown RBP15.39■□□□□ 0.05
SF3B2-202ENST00000524475 LRRC8AQ8IWT6 810 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 CADM4Q8NFZ8 388 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 PCDH19Q8TAB3 1148 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 UBE2Q2Q8WVN8 375 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 LRIG1Q96JA1 1093 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 CALN1Q9BXU9 219 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 SGK2Q9HBY8 427 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 ETNK2Q9NVF9 386 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 UBA2Q9UBT2 640 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-202ENST00000524475 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 TFR2Q9UP52 801 aa15.39■□□□□ 0.05
SF3B2-202ENST00000524475 C3orf70A6NLC5 250 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 C10orf142B7Z368 130 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 SLC7A4O43246 635 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 BUB1O43683 1085 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 NRDCO43847 1150 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 TMCC1O94876 653 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 PRNPP04156 253 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 CHRNA3P32297 505 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 SLC8A1P32418 973 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 HOXD12P35452 270 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 GJC1P36383 396 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 RECQLP46063 649 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 SNRPD1P62314 119 aaKnown RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 RPL6Q02878 288 aaKnown RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 IL10RBQ08334 325 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 MMRN1Q13201 1228 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 TAZQ16635 292 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 CARD16Q5EG05 197 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 DPY19L3Q6ZPD9 716 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 ZNF662Q6ZS27 426 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 ZNF354CQ86Y25 554 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 RNF10Q8N5U6 811 aaKnown RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 OR2AP1Q8NGE2 309 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 RAPGEF5Q92565 580 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 FATE1Q969F0 183 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 TOE1Q96GM8 510 aaKnown RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 ZNF419Q96HQ0 510 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 CELF6Q96J87 481 aaKnown RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 CD93Q9NPY3 652 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 NCKAP1Q9Y2A7 1128 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 FCF1Q9Y324 198 aaKnown RBP15.38■□□□□ 0.05
SF3B2-202ENST00000524475 MFHAS1Q9Y4C4 1052 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 ADGRG1Q9Y653 693 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
SF3B2-202ENST00000524475 NUMA1Q14980 2115 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 MID1O15344 667 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 MAP3K13O43283 966 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 IL1BP01584 269 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 CTSLP07711 333 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-202ENST00000524475 DRD3P35462 400 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 PSMD8P48556 350 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 CCNHP51946 323 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-202ENST00000524475 PEAR1Q5VY43 1037 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-202ENST00000524475 NCBP2-AS2Q69YL0 99 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 SLC9A4Q6AI14 798 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 DAAM2Q86T65 1068 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 KATNAL2Q8IYT4 538 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 AADATQ8N5Z0 425 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 GPR161Q8N6U8 529 aaKnown RBP15.37■□□□□ 0.05
SF3B2-202ENST00000524475 PQLC3Q8N755 202 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 FRMD1Q8N878 549 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 LRRC57Q8N9N7 239 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 PIP4K2CQ8TBX8 421 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 FOXJ1Q92949 421 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 RNF157Q96PX1 679 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 HEPHQ9BQS7 1158 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 DESI2Q9BSY9 194 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 TSGA10Q9BZW7 698 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 BTBD1Q9H0C5 482 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 KDM4CQ9H3R0 1056 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 FBXL12Q9NXK8 326 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 IL36AQ9UHA7 158 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 IPO11Q9UI26 975 aaKnown RBP15.37■□□□□ 0.05
SF3B2-202ENST00000524475 TPX2Q9ULW0 747 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 396.9 ms