RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 INO80DQ53TQ3 878 aaPredicted RBP21.32■■□□□ 1
TRAPPC9-215ENST00000524162 H2AFVQ71UI9 128 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 FAM124AQ86V42 546 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 RGL4Q8IZJ4 473 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 DEFB119Q8N690 84 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 LRIG1Q96JA1 1093 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 PEBP4Q96S96 227 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 NUP85Q9BW27 656 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 TRIM5Q9C035 493 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 NEUROG2Q9H2A3 272 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 TMEM9BQ9NQ34 198 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 RXFP3Q9NSD7 469 aa21.32■■□□□ 1
TRAPPC9-215ENST00000524162 A0A1W2PP55 124 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 PATE3B3GLJ2 98 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 K7ERQ8 282 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 MYO1FO00160 1098 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 RNASEH2AO75792 299 aaKnown RBP21.31■■□□□ 1
TRAPPC9-215ENST00000524162 SYPP08247 313 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 GLDCP23378 1020 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 CHRNA3P32297 505 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 NUDT1P36639 197 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 ACVRL1P37023 503 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 RECQLP46063 649 aaPredicted RBP21.31■■□□□ 1
TRAPPC9-215ENST00000524162 HDDC3Q8N4P3 179 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 PIP4K2CQ8TBX8 421 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 CTNNBL1Q8WYA6 563 aaPredicted RBP21.31■■□□□ 1
TRAPPC9-215ENST00000524162 BIRC7Q96CA5 298 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 DHX35Q9H5Z1 703 aaKnown RBP21.31■■□□□ 1
TRAPPC9-215ENST00000524162 C6orf106Q9H6K1 298 aaPredicted RBP21.31■■□□□ 1
TRAPPC9-215ENST00000524162 SERGEFQ9UGK8 458 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 ANAPC7Q9UJX3 599 aa21.31■■□□□ 1
TRAPPC9-215ENST00000524162 AKR1B15C9JRZ8 316 aaPredicted RBP21.3■■□□□ 1
TRAPPC9-215ENST00000524162 CDX4O14627 284 aaPredicted RBP21.3■■□□□ 1
TRAPPC9-215ENST00000524162 BCAT2O15382 392 aaPredicted RBP21.3■■□□□ 1
TRAPPC9-215ENST00000524162 CD27P26842 260 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 ADPRHP54922 357 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 SERINC3Q13530 473 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 KIAA0895LQ68EN5 471 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 LINGO4Q6UY18 593 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 RFX8Q6ZV50 586 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 LZTR1Q8N653 840 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 GANCQ8TET4 914 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 MRFAP1L1Q96HT8 127 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 CCDC42Q96M95 316 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 DEF6Q9H4E7 631 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 LRRC19Q9H756 370 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 PCSK1NQ9UHG2 260 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 SARDHQ9UL12 918 aa21.3■■□□□ 1
TRAPPC9-215ENST00000524162 TRPM6Q9BX84 2022 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 EEF2KO00418 725 aaKnown RBP21.29■■□□□ 1
TRAPPC9-215ENST00000524162 ARHGAP33O14559 1287 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 LATO43561 262 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 PLRG1O43660 514 aaKnown RBP21.29■■□□□ 1
TRAPPC9-215ENST00000524162 AKR1B10O60218 316 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 GSRP00390 522 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 TMEM253P0C7T8 217 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 ENGP17813 658 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 NUMBP49757 651 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 CA9Q16790 459 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 CARD16Q5EG05 197 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 DAB2IPQ5VWQ8 1189 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 AFMIDQ63HM1 303 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 NEK5Q6P3R8 708 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 FAM71BQ8TC56 605 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 ARHGEF26Q96DR7 871 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 PPP1R16AQ96I34 528 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 HDAC8Q9BY41 377 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 ZWILCHQ9H900 591 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 RCOR3Q9P2K3 495 aaPredicted RBP21.29■■□□□ 1
TRAPPC9-215ENST00000524162 IL36AQ9UHA7 158 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 EIF2B4Q9UI10 523 aaKnown RBP21.29■■□□□ 1
TRAPPC9-215ENST00000524162 INTUQ9ULD6 942 aa21.29■■□□□ 1
TRAPPC9-215ENST00000524162 ATXN2Q99700 1313 aaKnown RBP21.29■■□□□ 1
TRAPPC9-215ENST00000524162 DOCK9Q9BZ29 2069 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 NCOR2Q9Y618 2525 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 UPK3BL1B0FP48 263 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 RASA4BC9J798 803 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 UPK3BL2E5RIL1 263 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 RASA4O43374 803 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 CFIP05156 583 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 IGHV4-34P06331 123 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 CTSLP07711 333 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 AFF3P51826 1226 aaKnown RBP21.28■■□□□ 1
TRAPPC9-215ENST00000524162 ADKP55263 362 aaKnown RBP21.28■■□□□ 1
TRAPPC9-215ENST00000524162 DPYSQ14117 519 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 TCEAL1Q15170 157 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 AGBL4Q5VU57 503 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 DPY19L3Q6ZPD9 716 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 DGLUCYQ7Z3D6 616 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 ZNF564Q8TBZ8 553 aaPredicted RBP21.28■■□□□ 1
TRAPPC9-215ENST00000524162 KCTD15Q96SI1 283 aaPredicted RBP21.28■■□□□ 1
TRAPPC9-215ENST00000524162 HEPHQ9BQS7 1158 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 ORAI3Q9BRQ5 295 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 NHEJ1Q9H9Q4 299 aaPredicted RBP21.28■■□□□ 1
TRAPPC9-215ENST00000524162 PREBQ9HCU5 417 aa21.28■■□□□ 1
TRAPPC9-215ENST00000524162 PLXNA2O75051 1894 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 A0A1W2PPC4 97 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 H3BRJ5 948 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 MTA2O94776 668 aa21.27■■□□□ 1
TRAPPC9-215ENST00000524162 IL1R2P27930 398 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms