RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 CHST14Q8NCH0 376 aa19.53■□□□□ 0.72
FBXO28-205ENST00000523990 MRPL47Q9HD33 250 aaKnown RBP19.53■□□□□ 0.72
FBXO28-205ENST00000523990 GPATCH2LQ9NWQ4 482 aa19.53■□□□□ 0.72
FBXO28-205ENST00000523990 ARHGAP20Q9P2F6 1191 aa19.53■□□□□ 0.72
FBXO28-205ENST00000523990 FARP1Q9Y4F1 1045 aaPredicted RBP19.53■□□□□ 0.72
FBXO28-205ENST00000523990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.53■□□□□ 0.72
FBXO28-205ENST00000523990 A0A087X0T9 212 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 WASH4PA8MWX3 477 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 FGF10O15520 208 aaPredicted RBP19.52■□□□□ 0.72
FBXO28-205ENST00000523990 CBFA2T2O43439 604 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 PLRG1O43660 514 aaKnown RBP19.52■□□□□ 0.72
FBXO28-205ENST00000523990 OPHN1O60890 802 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 LRCH4O75427 683 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 ADRB1P08588 477 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 FAM228BP0C875 321 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 KCNA4P22459 653 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 CHRNA3P32297 505 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 HTR7P34969 479 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 POLD3Q15054 466 aaPredicted RBP19.52■□□□□ 0.72
FBXO28-205ENST00000523990 PSAPL1Q6NUJ1 521 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 DPY19L3Q6ZPD9 716 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 RNF214Q8ND24 703 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 TMIEQ8NEW7 156 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 SNRNP25Q9BV90 132 aaKnown RBP19.52■□□□□ 0.72
FBXO28-205ENST00000523990 KDM4CQ9H3R0 1056 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 CATSPERBQ9H7T0 1116 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 EBF2Q9HAK2 575 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 FCF1Q9Y324 198 aaKnown RBP19.52■□□□□ 0.72
FBXO28-205ENST00000523990 PCNX2A6NKB5 2137 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 KNL1Q8NG31 2342 aa19.52■□□□□ 0.72
FBXO28-205ENST00000523990 ANKRD36A6QL64 1941 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 A0A1W2PPC4 97 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 RNF103O00237 685 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 RNF8O76064 485 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 PRNPP04156 253 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 CSRP1P21291 193 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 MIPP30301 263 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 HNRNPH3P31942 346 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 GRIA4P48058 902 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 CCR5P51681 352 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 GEMIN4P57678 1058 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 TPI1P60174 286 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 PPP2CBP62714 309 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 PPP2CAP67775 309 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 CA9Q16790 459 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 ERMARDQ5T6L9 678 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 PIP5KL1Q5T9C9 394 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 SPECC1LQ69YQ0 1117 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 GRIN3AQ8TCU5 1115 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 THAP2Q9H0W7 228 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 IL36AQ9UHA7 158 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 PCSK1NQ9UHG2 260 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 WASF2Q9Y6W5 498 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 A0A1B0GVT2 93 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 UPK3BL1B0FP48 263 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 EIF3CLB5ME19 914 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 UPK3BL2E5RIL1 263 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 KPNA3O00505 521 aaPredicted RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 RECQLP46063 649 aaPredicted RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 CSNK1EP49674 416 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 NOVA1P51513 510 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 TRIM14Q14142 442 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 LAYNQ6UX15 382 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 ISG20Q96AZ6 181 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 ARRDC3Q96B67 414 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 EIF3CQ99613 913 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 DHX35Q9H5Z1 703 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 TPX2Q9ULW0 747 aaKnown RBP19.51■□□□□ 0.71
FBXO28-205ENST00000523990 HPCAL4Q9UM19 191 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 NENFQ9UMX5 172 aa19.51■□□□□ 0.71
FBXO28-205ENST00000523990 FRYQ5TBA9 3013 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 ZSCAN5CA6NGD5 496 aaPredicted RBP19.5■□□□□ 0.71
FBXO28-205ENST00000523990 GIPC1O14908 333 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 LATO43561 262 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 KDELR3O43731 214 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 PRPSAP2O60256 369 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 LEFTY1O75610 366 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 CCNHP51946 323 aaPredicted RBP19.5■□□□□ 0.71
FBXO28-205ENST00000523990 YBEYP58557 167 aaPredicted RBP19.5■□□□□ 0.71
FBXO28-205ENST00000523990 TAS2R38P59533 333 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 RACK1P63244 317 aaKnown RBP19.5■□□□□ 0.71
FBXO28-205ENST00000523990 TEAD4Q15561 434 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 PARP15Q460N3 678 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 CARD16Q5EG05 197 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 ARSIQ5FYB1 569 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 ALKBH5Q6P6C2 394 aaKnown RBP19.5■□□□□ 0.71
FBXO28-205ENST00000523990 IL27RAQ6UWB1 636 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 PIP4P1Q86T03 277 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 UMODL1-AS1Q8N2C9 162 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 DEFB124Q8NES8 71 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 HMCESQ96FZ2 354 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 SLC6A18Q96N87 628 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 KCTD15Q96SI1 283 aaPredicted RBP19.5■□□□□ 0.71
FBXO28-205ENST00000523990 DNAJC7Q99615 494 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 TM6SF2Q9BZW4 377 aa19.5■□□□□ 0.71
FBXO28-205ENST00000523990 TRPM6Q9BX84 2022 aa19.49■□□□□ 0.71
FBXO28-205ENST00000523990 TBC1D3DA0A087WVF3 549 aa19.49■□□□□ 0.71
FBXO28-205ENST00000523990 TBC1D3IA0A087WXS9 549 aa19.49■□□□□ 0.71
FBXO28-205ENST00000523990 TBC1D3EA0A087X179 549 aa19.49■□□□□ 0.71
FBXO28-205ENST00000523990 TBC1D3KA0A087X1G2 549 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms