RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CD160O95971 181 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 GSRP00390 522 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 VAV1P15498 845 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 GJC1P36383 396 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 PSMD8P48556 350 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
VEGFA-225ENST00000523950 IL10RBQ08334 325 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 DPYSL3Q14195 570 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 RFTN1Q14699 578 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-225ENST00000523950 CARD16Q5EG05 197 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 TMCO4Q5TGY1 634 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 LYSMD4Q5XG99 296 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 CACUL1Q86Y37 369 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 LRRC49Q8IUZ0 686 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 ARHGAP12Q8IWW6 846 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 NPWQ8N729 165 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 TMIEQ8NEW7 156 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 FAM131CQ96AQ9 280 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 FAF2Q96CS3 445 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 TRIM44Q96DX7 344 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF419Q96HQ0 510 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-225ENST00000523950 CALN1Q9BXU9 219 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 SLC39A8Q9C0K1 460 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 PDFQ9HBH1 243 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 CD93Q9NPY3 652 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 FBXL12Q9NXK8 326 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-225ENST00000523950 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 RALGAPA1Q6GYQ0 2036 aa12.79□□□□□ -0.36
VEGFA-225ENST00000523950 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 BCLAF3A2AJT9 711 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 SPOPO43791 374 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 NRDCO43847 1150 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF821O75541 412 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 TMCC1O94876 653 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 COMTP21964 271 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 AMPD1P23109 780 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 IL4RP24394 825 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 CHRNA3P32297 505 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 DHPSP49366 369 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 PAPOLAP51003 745 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF33AQ06730 810 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 PAFAH1B3Q15102 231 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 IFI16Q16666 785 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ANKRD20A8PQ5CZ79 823 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ZFYVE27Q5T4F4 411 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 DPY19L3Q6ZPD9 716 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 CYP2U1Q7Z449 544 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 CPNE8Q86YQ8 564 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ABCA7Q8IZY2 2146 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 HDDC3Q8N4P3 179 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 OR2AP1Q8NGE2 309 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 PIP4K2CQ8TBX8 421 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 PPP1R16AQ96I34 528 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 CELF6Q96J87 481 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ZNF599Q96NL3 588 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 OMDQ99983 421 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 HEPHQ9BQS7 1158 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 OSBPL1AQ9BXW6 950 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 TNKS2Q9H2K2 1166 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 SP110Q9HB58 689 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 VPS45Q9NRW7 570 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 IL36AQ9UHA7 158 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 FCF1Q9Y324 198 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 REXO2Q9Y3B8 237 aaKnown RBP12.78□□□□□ -0.36
VEGFA-225ENST00000523950 ALG6Q9Y672 507 aa12.78□□□□□ -0.36
VEGFA-225ENST00000523950 A0A1W2PP55 124 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 LRRC72A6NJI9 287 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 DFFAO00273 331 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 ARHGAP6O43182 974 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 BNIP3LO60238 219 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 RNASEH2AO75792 299 aaKnown RBP12.77□□□□□ -0.37
VEGFA-225ENST00000523950 SEMA4FO95754 770 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 IGSF6O95976 241 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 CD48P09326 243 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 KDELR1P24390 212 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 MPLP40238 635 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-225ENST00000523950 CREB5Q02930 508 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 RAD51Q06609 339 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 KIF5AQ12840 1032 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 GRM3Q14832 879 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 CSRP2Q16527 193 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 PLA2G2CQ5R387 149 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 SYT12Q8IV01 421 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 AADATQ8N5Z0 425 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.37
VEGFA-225ENST00000523950 TPCN2Q8NHX9 752 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms