RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 GRIA1P42261 906 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 RUNX3Q13761 415 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 ARTNQ5T4W7 220 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 ATXN7L2Q5T6C5 722 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 RETSATQ6NUM9 610 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 CCNI2Q6ZMN8 369 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 SYDE1Q6ZW31 735 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 CSGALNACT1Q8TDX6 532 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 SEMA3CQ99985 751 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 PRDM16Q9HAZ2 1276 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MAD1L1Q9Y6D9 718 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MUC3AQ02505 3323 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 CRADDP78560 199 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 CUL1Q13616 776 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 POM121L1PQ3SYA9 428 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 PITRM1Q5JRX3 1037 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 ITPRIPL1Q6GPH6 555 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 SLC25A41Q8N5S1 370 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 UBLCP1Q8WVY7 318 aaPredicted RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 CPT1BQ92523 772 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 OTUB2Q96DC9 234 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 ARFGAP3Q9NP61 516 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 GDF3Q9NR23 364 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 GRHL1Q9NZI5 618 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 SLCO3A1Q9UIG8 710 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 INTS6Q9UL03 887 aaKnown RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 NEU2Q9Y3R4 380 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 DNALI1O14645 258 aaPredicted RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 SMAD6O43541 496 aaKnown RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 PRAMEF11O60813 436 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 TMCC1O94876 653 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 TMEM63AO94886 807 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 IL9P15248 144 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 POLR2EP19388 210 aaKnown RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 GKP32189 559 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 WASP42768 502 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 ARF5P84085 180 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 IL10RBQ08334 325 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 PPP1R21Q6ZMI0 780 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 SFTPA1Q8IWL2 248 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 CPA6Q8N4T0 437 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 FIBINQ8TAL6 211 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 MRRFQ96E11 262 aaKnown RBP9.51□□□□□ -0.89
SDCBP-212ENST00000523483 C9orf72Q96LT7 481 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 TEKT5Q96M29 485 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 BRD8Q9H0E9 1235 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 MTG2Q9H4K7 406 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 HPS4Q9NQG7 708 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 RAD54BQ9Y620 910 aa9.51□□□□□ -0.89
SDCBP-212ENST00000523483 ANTXRLA6NF34 631 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 C5orf60A6NFR6 353 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 TPH1P17752 444 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 ITIH2P19823 946 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 CD72P21854 359 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SMAD4Q13485 552 aaKnown RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 HNRNPDQ14103 355 aaKnown RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 FUT11Q495W5 492 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 MAP9Q49MG5 647 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 MBLAC2Q68D91 279 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 MTSS1LQ765P7 747 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 PPIL6Q8IXY8 311 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SLCO2A1Q92959 643 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 CHFRQ96EP1 664 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 FAM83CQ9BQN1 747 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 KCNK12Q9HB15 430 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 TTC28Q96AY4 2481 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 DENND4CQ5VZ89 1909 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 ATP9BO43861 1147 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 GCATO75600 419 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 ACSL3O95573 720 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 POU3F3P20264 500 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 CD68P34810 354 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 GJA4P35212 333 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 PDIA2Q13087 525 aaKnown RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 PDGFRLQ15198 375 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 ZBED8Q8IZ13 594 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 MAFAQ8NHW3 353 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 GRIN3AQ8TCU5 1115 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 HEBP1Q9NRV9 189 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SEPT3Q9UH03 358 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SLC25A13Q9UJS0 675 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 PLA2G4CQ9UP65 541 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 FNDC3AQ9Y2H6 1198 aaKnown RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 MUSKO15146 869 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 KDELR3O43731 214 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 IVDP26440 423 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 NNMTP40261 264 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SEC13P55735 322 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 HIF1AQ16665 826 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 C5orf22Q49AR2 442 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 MPP7Q5T2T1 576 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 FAM217AQ8IXS0 508 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 DCAF4L2Q8NA75 395 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms