RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RNASE9P60153 205 aaKnown RBP26.52■■□□□ 1.84
PVT1-219ENST00000523427 C11orf57Q6ZUT1 292 aaPredicted RBP26.52■■□□□ 1.84
PVT1-219ENST00000523427 TFAP2DQ7Z6R9 452 aa26.52■■□□□ 1.84
PVT1-219ENST00000523427 C1orf131Q8NDD1 294 aaKnown RBP26.52■■□□□ 1.84
PVT1-219ENST00000523427 TMIEQ8NEW7 156 aa26.52■■□□□ 1.84
PVT1-219ENST00000523427 KCNE4Q8WWG9 221 aa26.52■■□□□ 1.84
PVT1-219ENST00000523427 TIGD1Q96MW7 591 aa26.52■■□□□ 1.84
PVT1-219ENST00000523427 ASNSD1Q9NWL6 643 aa26.52■■□□□ 1.84
PVT1-219ENST00000523427 NLGN3Q9NZ94 848 aa26.52■■□□□ 1.84
PVT1-219ENST00000523427 A0A0D9SEW6 157 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 CPED1A4D0V7 1026 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 K7ESM1 405 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 ERBB2P04626 1255 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 RECQLP46063 649 aaPredicted RBP26.51■■□□□ 1.83
PVT1-219ENST00000523427 DUSP3P51452 185 aaPredicted RBP26.51■■□□□ 1.83
PVT1-219ENST00000523427 DNA2P51530 1060 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 LSMEM2Q8N112 164 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 IFI44Q8TCB0 444 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 HIC2Q96JB3 615 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 SPON2Q9BUD6 331 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.51■■□□□ 1.831e-6■□□□□ 9.2
PVT1-219ENST00000523427 TKTL2Q9H0I9 626 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 POLR1BQ9H9Y6 1135 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 ANLNQ9NQW6 1124 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 MPP6Q9NZW5 540 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 IL36AQ9UHA7 158 aa26.51■■□□□ 1.83
PVT1-219ENST00000523427 A6NNZ2 444 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 ERVH48-1M5A8F1 160 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 SCAMP1O15126 338 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 PAK4O96013 591 aaPredicted RBP26.5■■□□□ 1.83
PVT1-219ENST00000523427 SLC9A1P19634 815 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 LSSP48449 732 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 CDKN3Q16667 212 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 C3orf38Q5JPI3 329 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 CRTC1Q6UUV9 634 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 OLFML1Q6UWY5 402 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 ENOSF1Q7L5Y1 443 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 WDCPQ9H6R7 721 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 PIGVQ9NUD9 493 aa26.5■■□□□ 1.83
PVT1-219ENST00000523427 IPO11Q9UI26 975 aaKnown RBP26.5■■□□□ 1.83
PVT1-219ENST00000523427 LY6G6EA0A0G2JKS1 128 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 POM121BA6NF01 834 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 DAB1O75553 588 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 LEFTY1O75610 366 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 TFE3P19532 575 aaPredicted RBP26.49■■□□□ 1.83
PVT1-219ENST00000523427 NOS2P35228 1153 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 HNRNPKP61978 463 aaKnown RBP eCLIP26.49■■□□□ 1.835e-7■■■□□ 15.8
PVT1-219ENST00000523427 PAK1Q13153 545 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 C22orf39Q6P5X5 142 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 TRIM65Q6PJ69 517 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 DPY19L3Q6ZPD9 716 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 ABI3BPQ7Z7G0 1075 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 OR7D4Q8NG98 312 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 VCPIP1Q96JH7 1222 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 BMFQ96LC9 184 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 PLCB1Q9NQ66 1216 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 TMPRSS4Q9NRS4 437 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 EVA1BQ9NVM1 165 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 U3KQA8 63 aa26.49■■□□□ 1.83
PVT1-219ENST00000523427 J3QKU1 62 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 RAD51BO15315 384 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 SULT1E1P49888 294 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 SLC6A3Q01959 620 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 MTA1Q13330 715 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 LY6DQ14210 128 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 C5orf22Q49AR2 442 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 FOXR1Q6PIV2 292 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 PPP1R16AQ96I34 528 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 DUSP23Q9BVJ7 150 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 HDAC8Q9BY41 377 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 SLC17A9Q9BYT1 436 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 WDR70Q9NW82 654 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 SATB2Q9UPW6 733 aa26.48■■□□□ 1.83
PVT1-219ENST00000523427 I6L893 689 aaPredicted RBP26.47■■□□□ 1.83
PVT1-219ENST00000523427 SRGAP2O75044 1071 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 GP1BAP07359 652 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 TGM2P21980 687 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 KRT9P35527 623 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 UCNP55089 124 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 MARSP56192 900 aaKnown RBP26.47■■□□□ 1.83
PVT1-219ENST00000523427 RHDQ02161 417 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 MORC3Q14149 939 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 FGL2Q14314 439 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 FZD2Q14332 565 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 ISXQ2M1V0 245 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 PTPN20Q4JDL3 420 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 TMEM259Q4ZIN3 620 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 OTUD1Q5VV17 481 aaPredicted RBP26.47■■□□□ 1.83
PVT1-219ENST00000523427 LRRC31Q6UY01 552 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 EFL1Q7Z2Z2 1120 aaKnown RBP26.47■■□□□ 1.83
PVT1-219ENST00000523427 DCAF4L2Q8NA75 395 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 ZNF548Q8NEK5 533 aaPredicted RBP26.47■■□□□ 1.83
PVT1-219ENST00000523427 SEMA4CQ9C0C4 833 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 THSD1Q9NS62 852 aa26.47■■□□□ 1.83
PVT1-219ENST00000523427 TENM4Q6N022 2769 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 PYCARD-AS1I3L0S3 204 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 RBMS1P29558 406 aaKnown RBP26.46■■□□□ 1.83
PVT1-219ENST00000523427 OR1E1P30953 314 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 NEK3P51956 506 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 ERVPABLB-1P60509 514 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms