RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 RETSATQ6NUM9 610 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 WDR59Q6PJI9 974 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 ZNF783Q6ZMS7 281 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 DPY19L3Q6ZPD9 716 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 STRADAQ7RTN6 431 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 TRIM69Q86WT6 500 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 PHF13Q86YI8 300 aaPredicted RBP21.15■□□□□ 0.98
SDCBP-209ENST00000522243 ZCCHC14Q8WYQ9 949 aaKnown RBP21.15■□□□□ 0.98
SDCBP-209ENST00000522243 AGPAT1Q99943 283 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 MYOCQ99972 504 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 DNAI1Q9UI46 699 aa21.15■□□□□ 0.98
SDCBP-209ENST00000522243 TPX2Q9ULW0 747 aaKnown RBP21.15■□□□□ 0.98
SDCBP-209ENST00000522243 FCF1Q9Y324 198 aaKnown RBP21.15■□□□□ 0.98
SDCBP-209ENST00000522243 CABIN1Q9Y6J0 2220 aa21.14■□□□□ 0.98
SDCBP-209ENST00000522243 FAM221BA6H8Z2 402 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 TEX33O43247 280 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 ZNF821O75541 412 aaPredicted RBP21.14■□□□□ 0.97
SDCBP-209ENST00000522243 LRIG2O94898 1065 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 PRNPP04156 253 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 CALB1P05937 261 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 SERPINH1P50454 418 aaKnown RBP21.14■□□□□ 0.97
SDCBP-209ENST00000522243 NXPH1P58417 271 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 ANO6Q4KMQ2 910 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 MANEALQ5VSG8 457 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 TMIEQ8NEW7 156 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 CENPIQ92674 756 aaPredicted RBP21.14■□□□□ 0.97
SDCBP-209ENST00000522243 OSBPL2Q9H1P3 480 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 DYRK4Q9NR20 520 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 IL36AQ9UHA7 158 aa21.14■□□□□ 0.97
SDCBP-209ENST00000522243 KMT2BQ9UMN6 2715 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-209ENST00000522243 TMEM8BA6NDV4 472 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 SLC31A1O15431 190 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 LEFTY1O75610 366 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 ITGAVP06756 1048 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 PLEKP08567 350 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-209ENST00000522243 GSCP56915 257 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-209ENST00000522243 NRG1Q02297 640 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-209ENST00000522243 STAT4Q14765 748 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 MON1BQ7L1V2 547 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 NLRP14Q86W24 1093 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 SPATS2Q86XZ4 545 aaKnown RBP21.13■□□□□ 0.97
SDCBP-209ENST00000522243 MFSD2AQ8NA29 543 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 C3orf20Q8ND61 904 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 PREBQ9HCU5 417 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 DMTF1Q9Y222 760 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 WASF2Q9Y6W5 498 aa21.13■□□□□ 0.97
SDCBP-209ENST00000522243 A0A1W2PQU0 124 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 SIGLEC16A6NMB1 481 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 CCP110O43303 1012 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 TNFSF14O43557 240 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 CD160O95971 181 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 PRLRP16471 622 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 RHOQP17081 205 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 SLC20A2Q08357 652 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 BNIP3Q12983 259 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 INAVAQ3KP66 663 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 SETMARQ53H47 684 aaPredicted RBP21.12■□□□□ 0.97
SDCBP-209ENST00000522243 CARD16Q5EG05 197 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 DNAJC24Q6P3W2 148 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 SCYL2Q6P3W7 929 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 LEKR1Q6ZMV7 388 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 ERN2Q76MJ5 926 aaKnown RBP21.12■□□□□ 0.97
SDCBP-209ENST00000522243 MARCH9Q86YJ5 346 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 PYROXD2Q8N2H3 581 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 ARHGEF2Q92974 986 aaKnown RBP21.12■□□□□ 0.97
SDCBP-209ENST00000522243 TBC1D31Q96DN5 1066 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 TM6SF2Q9BZW4 377 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 FTSJ1Q9UET6 329 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 CHD5Q8TDI0 1954 aa21.12■□□□□ 0.97
SDCBP-209ENST00000522243 TCRBV5S1A1TA0A578 114 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 PRAMEF26H0Y7S4 382 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 PCDH8O95206 1070 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 FERP16591 822 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 MAPKAPK2P49137 400 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 CCNHP51946 323 aaPredicted RBP21.11■□□□□ 0.97
SDCBP-209ENST00000522243 RPL7AP62424 266 aaKnown RBP21.11■□□□□ 0.97
SDCBP-209ENST00000522243 C1QBPQ07021 282 aaKnown RBP21.11■□□□□ 0.97
SDCBP-209ENST00000522243 SLFN11Q7Z7L1 901 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 PCDH20Q8N6Y1 951 aaKnown RBP21.11■□□□□ 0.97
SDCBP-209ENST00000522243 SAP25Q8TEE9 199 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 MCEEQ96PE7 176 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 HEPHQ9BQS7 1158 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 CEP44Q9C0F1 390 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 FZD3Q9NPG1 666 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 TMEM248Q9NWD8 314 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 NEU3Q9UQ49 428 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 EPG5Q9HCE0 2579 aa21.11■□□□□ 0.97
SDCBP-209ENST00000522243 DKK1O94907 266 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 EPHA8P29322 1005 aaPredicted RBP21.1■□□□□ 0.97
SDCBP-209ENST00000522243 GKP32189 559 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 NUDT1P36639 197 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 ARRB1P49407 418 aaPredicted RBP21.1■□□□□ 0.97
SDCBP-209ENST00000522243 CCDC15Q0P6D6 951 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 SCAPQ12770 1279 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 ACAD10Q6JQN1 1059 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 CCNI2Q6ZMN8 369 aaPredicted RBP21.1■□□□□ 0.97
SDCBP-209ENST00000522243 HORMAD1Q86X24 394 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 RYBPQ8N488 228 aaPredicted RBP21.1■□□□□ 0.97
SDCBP-209ENST00000522243 EID2Q8N6I1 236 aa21.1■□□□□ 0.97
SDCBP-209ENST00000522243 OR6K2Q8NGY2 324 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms