RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CASKIN2Q8WXE0 1202 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 TMEM121Q9BTD3 319 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 LMAN1LQ9HAT1 526 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 SEPT10Q9P0V9 454 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 ZNF148Q9UQR1 794 aa24.6■■□□□ 1.53
PVT1-212ENST00000521951 FCF1Q9Y324 198 aaKnown RBP24.6■■□□□ 1.53
PVT1-212ENST00000521951 STK25O00506 426 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 ATP9BO43861 1147 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 RNF40O75150 1001 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 PHF2O75151 1096 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 TMCC1O94876 653 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 JCHAINP01591 159 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 KCNJ1P48048 391 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 RENBPP51606 427 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 IFI35P80217 286 aaPredicted RBP24.59■■□□□ 1.53
PVT1-212ENST00000521951 MRPS21P82921 87 aaKnown RBP24.59■■□□□ 1.53
PVT1-212ENST00000521951 FZD5Q13467 585 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 E2F5Q15329 346 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 DLG2Q15700 870 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 MARC1Q5VT66 337 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 TRIM67Q6ZTA4 783 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 TEX26Q8N6G2 289 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 TTC28Q96AY4 2481 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 IL12RB2Q99665 862 aa24.59■■□□□ 1.53
PVT1-212ENST00000521951 TTC34A8MYJ7 566 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 WASH3PC4AMC7 463 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 NPC1O15118 1278 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 KCNN4O15554 427 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 MTSS1O43312 755 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 ITGAVP06756 1048 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 ALADP13716 330 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 COILP38432 576 aaPredicted RBP24.58■■□□□ 1.53
PVT1-212ENST00000521951 IL12RB1P42701 662 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 CKAP4Q07065 602 aaKnown RBP24.58■■□□□ 1.53
PVT1-212ENST00000521951 WASHC5Q12768 1159 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 ZBTB17Q13105 803 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 ACCSLQ4AC99 568 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 TTC27Q6P3X3 843 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 ZNF572Q7Z3I7 529 aaPredicted RBP24.58■■□□□ 1.53
PVT1-212ENST00000521951 METTL3Q86U44 580 aaKnown RBP24.58■■□□□ 1.53
PVT1-212ENST00000521951 CCDC26Q8TAB7 109 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 TMEM245Q9H330 911 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 RBM22Q9NW64 420 aaKnown RBP eCLIP24.58■■□□□ 1.539e-7■■■□□ 15.2
PVT1-212ENST00000521951 CACNA2D2Q9NY47 1150 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 TECTAO75443 2155 aa24.58■■□□□ 1.53
PVT1-212ENST00000521951 CFAP69A5D8W1 941 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 ZNF821O75541 412 aaPredicted RBP24.57■■□□□ 1.52
PVT1-212ENST00000521951 PTPN3P26045 913 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 ENPP2Q13822 863 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 LRRC32Q14392 662 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 SERPINA13PQ6UXR4 307 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 CHPFQ8IZ52 775 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 FAM71DQ8N9W8 422 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 IL17RCQ8NAC3 791 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 SPATA4Q8NEY3 305 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 FRS2Q8WU20 508 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 ZNF419Q96HQ0 510 aaPredicted RBP24.57■■□□□ 1.52
PVT1-212ENST00000521951 FERMT1Q9BQL6 677 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 CEP41Q9BYV8 373 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 DDX47Q9H0S4 455 aaKnown RBP24.57■■□□□ 1.52
PVT1-212ENST00000521951 SEPT3Q9UH03 358 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 STON1Q9Y6Q2 735 aa24.57■■□□□ 1.52
PVT1-212ENST00000521951 CCDC188H7C350 402 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 STIP1P31948 543 aaKnown RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 MMP13P45452 471 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 NRLP54845 237 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 GDF10P55107 478 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 TEX44Q53QW1 395 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 C22orf39Q6P5X5 142 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 CCDC137Q6PK04 289 aaKnown RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 SYNPOQ8N3V7 929 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 ALLCQ8N6M5 410 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 ZNF366Q8N895 744 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 TSEN2Q8NCE0 465 aaKnown RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 ATL2Q8NHH9 583 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 ISG20Q96AZ6 181 aaKnown RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 CINPQ9BW66 212 aaPredicted RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 OSBPL6Q9BZF3 934 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 CEP44Q9C0F1 390 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 MTG2Q9H4K7 406 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 LHX3Q9UBR4 397 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 SLC8A2Q9UPR5 921 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 RNF103O00237 685 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 ZNF189O75820 626 aaPredicted RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 KLF8O95600 359 aaPredicted RBP24.56■■□□□ 1.52
PVT1-212ENST00000521951 HLA-EP13747 358 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 PRKCHP24723 683 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 NTSR1P30989 418 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 CHRNA3P32297 505 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 WASP42768 502 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 FNTAP49354 379 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 ZNF235Q14590 738 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 BBS5Q8N3I7 341 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 PGBD5Q8N414 524 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 CNTD1Q8N815 330 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 PJA1Q8NG27 643 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 RPLP0P6Q8NHW5 317 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 PSKH2Q96QS6 385 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 MFSD1Q9H3U5 465 aa24.56■■□□□ 1.52
PVT1-212ENST00000521951 NT5MQ9NPB1 228 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms