RNA–Protein interactions for RNA: ENST00000521825.1

TSNARE1-207, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 346 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-207ENST00000521825 CNTN1Q12860 1018 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 POM121L1PQ3SYA9 428 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 N4BP2L1Q5TBK1 243 aaPredicted RBP18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 AGBL4Q5VU57 503 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 DPY19L3Q6ZPD9 716 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 CYP4V2Q6ZWL3 525 aaPredicted RBP18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 PIP4P1Q86T03 277 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 RTL3Q8N8U3 475 aaKnown RBP18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 ARRDC3Q96B67 414 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 EPAS1Q99814 870 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 KDM4CQ9H3R0 1056 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 GPATCH2LQ9NWQ4 482 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 AP4E1Q9UPM8 1137 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 SCINQ9Y6U3 715 aa18.1■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3DA0A087WVF3 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3IA0A087WXS9 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 A0A087X0T9 212 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3EA0A087X179 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3KA0A087X1G2 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 A0A1B0GVT2 93 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3FA6NER0 549 aaPredicted RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3LB9A6J9 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 KDELR3O43731 214 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 RAMP2O60895 175 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3HP0C7X1 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 FAM228BP0C875 321 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 CD59P13987 128 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 GRIA4P48058 902 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 NOVA1P51513 510 aaKnown RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 PPP2CBP62714 309 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 PPP2CAP67775 309 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 POLD3Q15054 466 aaPredicted RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 CA9Q16790 459 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 ERMARDQ5T6L9 678 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3GQ6DHY5 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3CQ6IPX1 549 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 TBC1D3Q8IZP1 549 aaPredicted RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 PCDH20Q8N6Y1 951 aaKnown RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 DEFB124Q8NES8 71 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 SNRNP25Q9BV90 132 aaKnown RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 IL21RQ9HBE5 538 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 MRPL47Q9HD33 250 aaKnown RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 ARHGAP20Q9P2F6 1191 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 IL36AQ9UHA7 158 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 PCSK1NQ9UHG2 260 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 WASF2Q9Y6W5 498 aa18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 CNOT1A5YKK6 2376 aaKnown RBP18.09■□□□□ 0.49
TSNARE1-207ENST00000521825 LRCH4O75427 683 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 LEFTY1O75610 366 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 RNF8O76064 485 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 PRNPP04156 253 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 CEACAM1P13688 526 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 MIPP30301 263 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 HNRNPH3P31942 346 aaKnown RBP18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 HTR7P34969 479 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 TAS2R38P59533 333 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 RACK1P63244 317 aaKnown RBP18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 SLC14A1Q13336 389 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 CARD16Q5EG05 197 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 ARSIQ5FYB1 569 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 PIP5KL1Q5T9C9 394 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 LAYNQ6UX15 382 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 VPS36Q86VN1 386 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 ISG20Q96AZ6 181 aaKnown RBP18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 KLC2Q9H0B6 622 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 THAP2Q9H0W7 228 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 GAREM1Q9H706 876 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 TPX2Q9ULW0 747 aaKnown RBP18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 NENFQ9UMX5 172 aa18.08■□□□□ 0.48
TSNARE1-207ENST00000521825 KPNA3O00505 521 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 WNT9AO14904 365 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 FGF10O15520 208 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 LATO43561 262 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 TPM3P06753 285 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 RECQLP46063 649 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 YBEYP58557 167 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 TPI1P60174 286 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 TEAD4Q15561 434 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 NFKBIBQ15653 356 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 KIF19Q2TAC6 998 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 HLA-BQ31612 363 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 KCNT1Q5JUK3 1230 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 IL27RAQ6UWB1 636 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 LEKR1Q6ZMV7 388 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 PLPP6Q8IY26 295 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 UMODL1-AS1Q8N2C9 162 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 GRIN3AQ8TCU5 1115 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 VOPP1Q96AW1 172 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 SLC6A18Q96N87 628 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 KCTD15Q96SI1 283 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 HEPHQ9BQS7 1158 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 DHX35Q9H5Z1 703 aaKnown RBP18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 HPCAL4Q9UM19 191 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 ANKRD6Q9Y2G4 727 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 SNX11Q9Y5W9 270 aa18.07■□□□□ 0.48
TSNARE1-207ENST00000521825 ZSCAN5CA6NGD5 496 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms