RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OMA1Q96E52 524 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 ATP13A3Q9H7F0 1226 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 WDR27A2RRH5 827 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 TRDMT1O14717 391 aaKnown RBP16.41■□□□□ 0.22
USP42-207ENST00000521713 FASP25445 335 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 PPP1R26Q5T8A7 1209 aaPredicted RBP16.41■□□□□ 0.22
USP42-207ENST00000521713 MTERF3Q96E29 417 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 TAS2R14Q9NYV8 317 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 TBL1XO60907 577 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 EOMESO95936 686 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 CES1P23141 567 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 GABRR2P28476 465 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 ST13P50502 369 aaKnown RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 NPAS4Q8IUM7 802 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 BAP1Q92560 729 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 OLFM1Q99784 485 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 MYLK2Q9H1R3 596 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 ZDHHC6Q9H6R6 413 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 ADAM30Q9UKF2 790 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 NCANO14594 1321 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 MGAT4DA6NG13 374 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 PRKAA1Q13131 559 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 MARK2Q7KZI7 788 aaKnown RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 SYTL1Q8IYJ3 562 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 DEFB107AQ8IZN7 70 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 FBXO22Q8NEZ5 403 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 PLEKHA8Q96JA3 519 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 MRPL45Q9BRJ2 306 aaKnown RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 MLPHQ9BV36 600 aaPredicted RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 Q9Y3F1 56 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 NALCNQ8IZF0 1738 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 PDE2AO00408 941 aaPredicted RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 ATP1A4Q13733 1029 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 RSBN1Q5VWQ0 802 aaPredicted RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 RD3Q7Z3Z2 195 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 CREG2Q8IUH2 290 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 F8W810 466 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 PEX10O60683 326 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 HNRNPH3P31942 346 aaKnown RBP16.4■□□□□ 0.22
USP42-207ENST00000521713 SERPINB5P36952 375 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 NCALDP61601 193 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 DGUOKQ16854 277 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 CCDC153Q494R4 210 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 C12orf29Q8N999 325 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 ZNF384Q8TF68 577 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 PLGRKTQ9HBL7 147 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 ADAM28Q9UKQ2 775 aa16.4■□□□□ 0.22
USP42-207ENST00000521713 SYN3O14994 580 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 KRT20P35900 424 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 CHN2P52757 468 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 DUSP4Q13115 394 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 MMRN1Q13201 1228 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 BOP1Q14137 746 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 TARBP2Q15633 366 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 CCDC157Q569K6 752 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 TTMPQ5BVD1 217 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 FAM46CQ5VWP2 391 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 PLPP4Q5VZY2 271 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 LAYNQ6UX15 382 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 CXorf40AQ8TE69 158 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 GORASP1Q9BQQ3 440 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 FGFR1P11362 822 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 PCID2Q5JVF3 399 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 PPP1R15BQ5SWA1 713 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 MFSD4BQ5TF39 518 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 LLGL2Q6P1M3 1020 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 NET1Q7Z628 596 aaPredicted RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 CLVS1Q8IUQ0 354 aaPredicted RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 FANCEQ9HB96 536 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 ETNK2Q9NVF9 386 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 DDX18Q9NVP1 670 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 VTI1BQ9UEU0 232 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 ANKRD6Q9Y2G4 727 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 CHADO15335 359 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 RGS5O15539 181 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 RPL21P46778 160 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 CCNG1P51959 295 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 XIAPP98170 497 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 RIPK1Q13546 671 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 BMPR2Q13873 1038 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 BBS12Q6ZW61 710 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 STRADAQ7RTN6 431 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 CKAP2Q8WWK9 683 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 THUMPD3Q9BV44 507 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 CEP44Q9C0F1 390 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 THAP1Q9NVV9 213 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 TBC1D14Q9P2M4 693 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 CLDN5O00501 218 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 PHGDHO43175 533 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 ADH1CP00326 375 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 RPL5P46777 297 aaKnown RBP16.39■□□□□ 0.21
USP42-207ENST00000521713 PIK3CGP48736 1102 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 NEPROQ6NW34 567 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 VPS33AQ96AX1 596 aa16.39■□□□□ 0.21
USP42-207ENST00000521713 H2AFY2Q9P0M6 372 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms