RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 VPS8Q8N3P4 1428 aa7.09□□□□□ -1.28
NUDCD1-204ENST00000521439 ITIH6Q6UXX5 1313 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 SMIM35A0A1B0GVV1 85 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 UGDHO60701 494 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 NEURL1O76050 574 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 RTN3O95197 1032 aaPredicted RBP7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 CBX6O95503 412 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 WNT1P04628 370 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 URODP06132 367 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 LCKP06239 509 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 TPM2P07951 284 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 CD72P21854 359 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 ATP5F1P24539 256 aaPredicted RBP7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 PTPN9P43378 593 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 CPA2P48052 419 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 RXRGP48443 463 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 RPS13P62277 151 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 FBXO43Q4G163 708 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 TMEM268Q5VZI3 342 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 GHDCQ8N2G8 530 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 HSPH1Q92598 858 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 ITFG2Q969R8 447 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 CLMNQ96JQ2 1002 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 C7orf26Q96N11 449 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 TEFMQ96QE5 360 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 ZNF304Q9HCX3 659 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 PAPOLBQ9NRJ5 636 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 ADARB2Q9NS39 739 aaKnown RBP7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 LAMP3Q9UQV4 416 aa7.08□□□□□ -1.28
NUDCD1-204ENST00000521439 ZNF335Q9H4Z2 1342 aaPredicted RBP7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 C17orf113A0A1B0GUU1 675 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 TP73O15350 636 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 BCAR3O75815 825 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 DDAH2O95865 285 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 FAM200BP0CF97 657 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 KLRC2P26717 231 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 CD38P28907 300 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 EPHB2P29323 1055 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 CIITAP33076 1130 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 PEX19P40855 299 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 DAZAP2Q15038 168 aaPredicted RBP7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 ISM2Q6H9L7 571 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 SYCE2Q6PIF2 218 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 R3HCC1LQ7Z5L2 792 aaKnown RBP7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 NFKBIDQ8NI38 313 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 WIPF2Q8TF74 440 aaPredicted RBP7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 FAR1Q8WVX9 515 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 IGFBPL1Q8WX77 278 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 SIGLEC11Q96RL6 698 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 QTRT1Q9BXR0 403 aaKnown RBP7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 HIPK3Q9H422 1215 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 OLA1Q9NTK5 396 aaKnown RBP7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 FBXO40Q9UH90 709 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 UTS2RQ9UKP6 389 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 NAALADL1Q9UQQ1 740 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 CLDN16Q9Y5I7 305 aa7.07□□□□□ -1.28
NUDCD1-204ENST00000521439 RHODO00212 210 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 PRPF4O43172 522 aaKnown RBP eCLIP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CEP104O60308 925 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 TMEM63AO94886 807 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CTSAP10619 480 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 NEFHP12036 1026 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 PTP4A2Q12974 167 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 RPE65Q16518 533 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CDC37Q16543 378 aaPredicted RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 PAPD7Q5XG87 772 aaKnown RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 TTLL5Q6EMB2 1281 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 INO80CQ6PI98 192 aaPredicted RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 MTERF4Q7Z6M4 381 aaKnown RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 TBC1D1Q86TI0 1168 aaPredicted RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 IGFN1Q86VF2 1251 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CHD1LQ86WJ1 897 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CCDC25Q86WR0 208 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CPXM2Q8N436 756 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 NGEFQ8N5V2 710 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 TDRD7Q8NHU6 1098 aaKnown RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 HDAC7Q8WUI4 952 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 UCMAQ8WVF2 138 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 SLC32A1Q9H598 525 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 SUDS3Q9H7L9 328 aaPredicted RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 TMEM45AQ9NWC5 275 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 GRHL1Q9NZI5 618 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 NLKQ9UBE8 527 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 AASSQ9UDR5 926 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 CAMK2AQ9UQM7 478 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 MST1RQ04912 1400 aa7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 RRBP1Q9P2E9 1410 aaKnown RBP7.06□□□□□ -1.28
NUDCD1-204ENST00000521439 SYNRGQ9UMZ2 1314 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 KIR2DS5A0A0G2JLQ3 304 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 A0A1W2PPH5 198 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 TARSL2A2RTX5 802 aaKnown RBP7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 FOXO6A8MYZ6 492 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 F8W810 466 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 KIR2DS3K7RE56 304 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 BAIAP3O94812 1187 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 LETM1O95202 739 aaPredicted RBP7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 ADAP00813 363 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 SERPINC1P01008 464 aa7.05□□□□□ -1.28
NUDCD1-204ENST00000521439 CAPN3P20807 821 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms