RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FHL2Q14192 279 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 KPNB1Q14974 876 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 ALG11Q2TAA5 492 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 ASPHD1Q5U4P2 390 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZNF280DQ6N043 979 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 TTI2Q6NXR4 508 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 RPUSD3Q6P087 351 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 CDC73Q6P1J9 531 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 NCEH1Q6PIU2 408 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 RBM44Q6ZP01 1051 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 IKBIPQ70UQ0 350 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 SZRD1Q7Z422 152 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 RPAP2Q8IXW5 612 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 CCDC105Q8IYK2 499 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 C16orf71Q8IYS4 520 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 NKAIN3Q8N8D7 197 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARL14EPQ8N8R7 260 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM98AQ8NCA5 519 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 TMEM116Q8NCL8 245 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 OR4N2Q8NGD1 307 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 TMEM170AQ8WVE7 144 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM120BQ96EK7 910 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 ADAD1Q96M93 576 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 FRG2BQ96QU4 278 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 FCRL5Q96RD9 977 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 NUAK2Q9H093 628 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 PDCL3Q9H2J4 239 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 IKZF4Q9H2S9 585 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 CXorf56Q9H5V9 222 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 VEZTQ9HBM0 779 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 ERVK-5Q9HDB9 667 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 DIAPH3Q9NSV4 1193 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 GRHL1Q9NZI5 618 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 GIMAP2Q9UG22 337 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 CORO1CQ9ULV4 474 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 SUFUQ9UMX1 484 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 KCNE2Q9Y6J6 123 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 AOX1Q06278 1338 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 EMSYQ7Z589 1322 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 GTPBP1O00178 669 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 JTBO76095 146 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 GALTP07902 379 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 HNRNPCP07910 306 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CSH1P0DML2 217 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CSH2P0DML3 217 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 RYKP34925 604 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARL1P40616 181 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 BLKP51451 505 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CACNA2D1P54289 1103 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 EIF3BP55884 814 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 OLR1P78380 273 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 MC1RQ01726 317 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CEBPZQ03701 1054 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC18A2Q05940 514 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 KRTAP1-1Q07627 177 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 PGM5Q15124 567 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 PROSER3Q2NL68 480 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 GLE1Q53GS7 698 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CEP85Q6P2H3 762 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 FBXO42Q6P3S6 717 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CLEC17AQ6ZS10 378 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 MOB3CQ70IA8 216 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZNF804AQ7Z570 1209 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CHSY1Q86X52 802 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 NEK9Q8TD19 979 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 PSPC1Q8WXF1 523 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC9A6Q92581 669 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 HSPH1Q92598 858 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 INTS12Q96CB8 462 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 KLHL29Q96CT2 875 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 DAZAP1Q96EP5 407 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CCDC17Q96LX7 622 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CADM1Q9BY67 442 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 EIF2B3Q9NR50 452 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 IL17RBQ9NRM6 502 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 SPATS2LQ9NUQ6 558 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 KIAA1456Q9P272 454 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 LRIT1Q9P2V4 623 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 CDH22Q9UJ99 828 aa3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 REXO2Q9Y3B8 237 aaKnown RBP3.68□□□□□ -1.82
HMGN1P28-201ENST00000521340 TEX13CA0A0J9YWL9 993 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM237BA0A1B0GVD1 139 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 PTGES3LE9PB15 166 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 POC1B-GALNT4F8VUJ3 575 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 BCAT2O15382 392 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 P4HA2O15460 535 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 NEURL1O76050 574 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 HLA-DQA2P01906 255 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 CYP2A6P11509 494 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZNF8P17098 575 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 CDH2P19022 906 aaPredicted RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 MAKP20794 623 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 GSTM2P28161 218 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 AVPR1BP47901 424 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 CXCR3P49682 368 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 RARSP54136 660 aaKnown RBP3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 OAZ1P54368 228 aa3.67□□□□□ -1.82
HMGN1P28-201ENST00000521340 SOX10P56693 466 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms