RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TNKS2Q9H2K2 1166 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 PPARGC1AQ9UBK2 798 aaKnown RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 DKK4Q9UBT3 224 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 CA5BQ9Y2D0 317 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 GPSM3Q9Y4H4 160 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 PCDHGA1Q9Y5H4 931 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 NBEAQ8NFP9 2946 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 TRPM6Q9BX84 2022 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 CHD5Q8TDI0 1954 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 KPNA3O00505 521 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 SLC31A1O15431 190 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 CD160O95971 181 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 PRNPP04156 253 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 C1SP09871 688 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 ADRA1BP35368 520 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 SOX5P35711 763 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 ATP11AP98196 1134 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 NRG1Q02297 640 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 GNA12Q03113 381 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 ZNF284Q2VY69 593 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 DPY19L3Q6ZPD9 716 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 RBM43Q6ZSC3 357 aaKnown RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 PHLDB2Q86SQ0 1253 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 TMPRSS12Q86WS5 348 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 HORMAD1Q86X24 394 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 OXR1Q8N573 874 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 MSANTD4Q8NCY6 345 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 SLC30A5Q8TAD4 765 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 CENPIQ92674 756 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 KLK6Q92876 244 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 CCDC114Q96M63 670 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 PCDHB18PQ96TA0 734 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 HDAC8Q9BY41 377 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 FAM207AQ9NSI2 230 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 FANCLQ9NW38 375 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 OR12D3Q9UGF7 316 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 IL36AQ9UHA7 158 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.37
CSMD1-205ENST00000519623 SIK3Q9Y2K2 1263 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 WASF2Q9Y6W5 498 aa12.71□□□□□ -0.37
CSMD1-205ENST00000519623 CELSR3Q9NYQ7 3312 aa12.71□□□□□ -0.38
CSMD1-205ENST00000519623 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.38
CSMD1-205ENST00000519623 C2CD4BA6NLJ0 364 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 LEFTY1O75610 366 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 GJB6O95452 261 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 UNGP13051 313 aaPredicted RBP12.7□□□□□ -0.38
CSMD1-205ENST00000519623 PRLRP16471 622 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 ACADVLP49748 655 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
CSMD1-205ENST00000519623 ARF5P84085 180 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 CYP4F3Q08477 520 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 PTP4A2Q12974 167 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 C15orf59Q2T9L4 293 aaPredicted RBP12.7□□□□□ -0.38
CSMD1-205ENST00000519623 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 RETSATQ6NUM9 610 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 ERN2Q76MJ5 926 aaKnown RBP12.7□□□□□ -0.38
CSMD1-205ENST00000519623 NLRP14Q86W24 1093 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 SLC25A45Q8N413 288 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
CSMD1-205ENST00000519623 JOSD2Q8TAC2 188 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 GPT2Q8TD30 523 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 CEP44Q9C0F1 390 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 OSBPL2Q9H1P3 480 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 NLRC4Q9NPP4 1024 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 NDFIP2Q9NV92 336 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 RAXQ9Y2V3 346 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 ATRXP46100 2492 aa12.7□□□□□ -0.38
CSMD1-205ENST00000519623 MYLKQ15746 1914 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 LRRC10BA6NIK2 292 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 FAM72CH0Y354 149 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 RFPL3O75679 317 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 CDK4P11802 303 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
CSMD1-205ENST00000519623 ACVRL1P37023 503 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 STAT1P42224 750 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 PTPN9P43378 593 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 RECQLP46063 649 aaPredicted RBP12.69□□□□□ -0.38
CSMD1-205ENST00000519623 CLDN6P56747 220 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 CDO1Q16878 200 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 TMEM259Q4ZIN3 620 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 CARD16Q5EG05 197 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 FAM72AQ5TYM5 149 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 FAM72DQ6L9T8 149 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 C19orf48Q6RUI8 117 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 FAM72BQ86X60 149 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 DRC7Q8IY82 874 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 PCDH20Q8N6Y1 951 aaKnown RBP12.69□□□□□ -0.38
CSMD1-205ENST00000519623 GRIN3AQ8TCU5 1115 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 HEPHQ9BQS7 1158 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms