RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 A0A0U1RQF3 1178 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 SMIM1B2RUZ4 78 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 SH2B2O14492 632 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 HSPB6O14558 160 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 TIMM23O14925 209 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 GAGE7O76087 117 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 CLDN7O95471 211 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 GAGE12FP0CL80 117 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 GAGE12GP0CL81 117 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 GAGE12IP0CL82 117 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 PRSS56P0CW18 603 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 KITP10721 976 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ENO3P13929 434 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 BTF3P20290 206 aaKnown RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 PITX1P78337 314 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ADORA2A-AS1P86434 159 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 TNFAIP2Q03169 654 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 GAGE1Q13065 139 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 GAGE4Q13068 117 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ITGA9Q13797 1035 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 TNFAIP1Q13829 316 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 CT47A1Q5JQC4 288 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ERAP2Q6P179 960 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 C16orf89Q6UX73 402 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 CATIPQ7Z7H3 387 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 DENND1CQ8IV53 801 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 SRFBP1Q8NEF9 429 aaKnown RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 STT3BQ8TCJ2 826 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 CGRRF1Q99675 332 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 FRMD8Q9BZ67 464 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 PUS7LQ9H0K6 701 aaKnown RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ACTR5Q9H9F9 607 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 CLK4Q9HAZ1 481 aaKnown RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 FGF22Q9HCT0 170 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 FAM118AQ9NWS6 357 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 HCFC1R1Q9NWW0 138 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ZKSCAN7Q9P0L1 754 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 NYAP2Q9P242 653 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 ZNF624Q9P2J8 865 aaPredicted RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 SIX4Q9UIU6 781 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 MID2Q9UJV3 735 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 MAN1B1Q9UKM7 699 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 CAPN11Q9UMQ6 739 aa0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 WBP11Q9Y2W2 641 aaKnown RBP0.56□□□□□ -2.32
SCARNA23-201ENST00000516060 AHNAK2Q8IVF2 5795 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 A0A1W2PPI3 338 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 SHTN1A0MZ66 631 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 TRIM43BA6NCK2 446 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 KIF3BO15066 747 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 DHX16O60231 1041 aaKnown RBP0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 ALDOCP09972 364 aaKnown RBP0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 RPL3P39023 403 aaKnown RBP0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 STAT1P42224 750 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 ECT2LQ008S8 904 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 CYP4A11Q02928 519 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 CCDC144NLQ6NUI1 221 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 SLC27A1Q6PCB7 646 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 NEK10Q6ZWH5 1172 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 KLBQ86Z14 1044 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 TICAM1Q8IUC6 712 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 TMEM217Q8N7C4 229 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 SPATA22Q8NHS9 363 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 GPT2Q8TD30 523 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 TRIM43Q96BQ3 446 aaPredicted RBP0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 MVB12AQ96EY5 273 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 C3orf30Q96M34 536 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 C8orf37Q96NL8 207 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 NT5C1BQ96P26 610 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 PKP2Q99959 881 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 GTPBP4Q9BZE4 634 aaKnown RBP0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 SFXN1Q9H9B4 322 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 SLC52A3Q9NQ40 469 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 ANAPC11Q9NYG5 84 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 RGS17Q9UGC6 210 aaPredicted RBP0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 ASIC3Q9UHC3 531 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 RARRES3Q9UL19 164 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 KCNS2Q9ULS6 477 aa0.55□□□□□ -2.32
SCARNA23-201ENST00000516060 IGKV6-21A0A0C4DH24 114 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 A0A1W2PPL8 197 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 CPED1A4D0V7 1026 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 J3KR12 359 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 IFNL4K9M1U5 179 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 GABRDO14764 452 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 KRT6AP02538 564 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 KRT6BP04259 564 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 ERVK-10P10266 1014 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 TXNP10599 105 aaKnown RBP0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 CDH1P12830 882 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 IL1R1P14778 569 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 DCTP40126 519 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 IL15P40933 162 aaPredicted RBP0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 KRT6CP48668 564 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 LIMK2P53671 638 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 RHAGQ02094 409 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 COX10Q12887 443 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 CCDC144BQ3MJ40 725 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 ARL13AQ5H913 290 aaPredicted RBP0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 CCNYL2Q5T2Q4 361 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 SYDE2Q5VT97 1194 aa0.54□□□□□ -2.32
SCARNA23-201ENST00000516060 SFMBT2Q5VUG0 894 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms