RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 DNAI1Q9UI46 699 aa13.05□□□□□ -0.32
CLCN3-210ENST00000515420 ADAMTS9Q9P2N4 1935 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 EEF2KO00418 725 aaKnown RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 TM4SF5O14894 197 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 BCAT2O15382 392 aaPredicted RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 SMAD6O43541 496 aaKnown RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 KDELR3O43731 214 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 ZNF821O75541 412 aaPredicted RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 ENGP17813 658 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 GLDCP23378 1020 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 CD27P26842 260 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 CHRNA3P32297 505 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 ACVRL1P37023 503 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 CCR5P51681 352 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 NDST2P52849 883 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 GALCP54803 685 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 DPYSL2Q16555 572 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 BOLA3Q53S33 107 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 HDDC3Q8N4P3 179 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 PIP4K2CQ8TBX8 421 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 PEBP4Q96S96 227 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 DHX35Q9H5Z1 703 aaKnown RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 NOL6Q9H6R4 1146 aaKnown RBP13.04□□□□□ -0.32
CLCN3-210ENST00000515420 UVRAGQ9P2Y5 699 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 ANAPC7Q9UJX3 599 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 SARDHQ9UL12 918 aa13.04□□□□□ -0.32
CLCN3-210ENST00000515420 DNAH14Q0VDD8 3507 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 K7ERQ8 282 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 MYO1FO00160 1098 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 PLRG1O43660 514 aaKnown RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 CD160O95971 181 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 GSRP00390 522 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 H2AFZP0C0S5 128 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 NUDT1P36639 197 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 GRIA4P48058 902 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 ADPRHP54922 357 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 SERINC3Q13530 473 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 INO80DQ53TQ3 878 aaPredicted RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 AGBL4Q5VU57 503 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 NCEH1Q6PIU2 408 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 RFX8Q6ZV50 586 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 H2AFVQ71UI9 128 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 CTNNBL1Q8WYA6 563 aaPredicted RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 BIRC7Q96CA5 298 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 PPP1R16AQ96I34 528 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 LRIG1Q96JA1 1093 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 KCTD15Q96SI1 283 aaPredicted RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 ZWILCHQ9H900 591 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 IL36AQ9UHA7 158 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 PCSK1NQ9UHG2 260 aa13.03□□□□□ -0.32
CLCN3-210ENST00000515420 EIF2B4Q9UI10 523 aaKnown RBP13.03□□□□□ -0.32
CLCN3-210ENST00000515420 A0A1W2PPC4 97 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 C4orf47A7E2U8 309 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 UPK3BL1B0FP48 263 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 RASA4BC9J798 803 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 AKR1B15C9JRZ8 316 aaPredicted RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 UPK3BL2E5RIL1 263 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 RASA4O43374 803 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 LATO43561 262 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 AKR1B10O60218 316 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 IGHV4-34P06331 123 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 CTSLP07711 333 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 MAOBP27338 520 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 AFF3P51826 1226 aaKnown RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 ATXN3P54252 364 aaPredicted RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 CA9Q16790 459 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 CARD16Q5EG05 197 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 IL27RAQ6UWB1 636 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 DPY19L3Q6ZPD9 716 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 TRIM69Q86WT6 500 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 LZTR1Q8N653 840 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 OR14C36Q8NHC7 312 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF564Q8TBZ8 553 aaPredicted RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 SNX19Q92543 992 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 ARHGEF26Q96DR7 871 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 HMCESQ96FZ2 354 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 HEPHQ9BQS7 1158 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 HDAC8Q9BY41 377 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 PREBQ9HCU5 417 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 DYRK4Q9NR20 520 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
CLCN3-210ENST00000515420 PLXNA2O75051 1894 aa13.02□□□□□ -0.33
CLCN3-210ENST00000515420 ARHGAP42A6NI28 874 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 H3BRJ5 948 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms