RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 MRGPRX2Q96LB1 330 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 FCRL3Q96P31 734 aaPredicted RBP13.07□□□□□ -0.32
PVT1-203ENST00000513868 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 NT5MQ9NPB1 228 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 MAN1C1Q9NR34 630 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 ASAH2Q9NR71 780 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 ACTL7BQ9Y614 415 aa13.07□□□□□ -0.32
PVT1-203ENST00000513868 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 A0A1W2PPM1 405 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 ILVBLA1L0T0 632 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 UGT1A9O60656 530 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 CHN1P15882 459 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 NUMBP49757 651 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 GEMP55040 296 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 MAXP61244 160 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 ERVK-21P61565 698 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 LBRQ14739 615 aaKnown RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 CRYMQ14894 314 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 TTC39BQ5VTQ0 682 aaPredicted RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 CASC4Q6P4E1 433 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 RANBP10Q6VN20 620 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 LEKR1Q6ZMV7 388 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 HTR3DQ70Z44 454 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 LINC00523Q86TU6 105 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 TMEM135Q86UB9 458 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 SRRM1Q8IYB3 904 aaKnown RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 SHKBP1Q8TBC3 707 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 ARRDC2Q8TBH0 407 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 TCEAL4Q96EI5 215 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 DDX50Q9BQ39 737 aaKnown RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 TBL1YQ9BQ87 522 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 SELENOSQ9BQE4 189 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 KIF9Q9HAQ2 790 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 UGT1A7Q9HAW7 530 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 UGT1A10Q9HAW8 530 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 UGT1A8Q9HAW9 530 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 BFARQ9NZS9 450 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 YBX2Q9Y2T7 364 aaKnown RBP13.06□□□□□ -0.32
PVT1-203ENST00000513868 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
PVT1-203ENST00000513868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 TRAV19A0A0A6YYK7 116 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 A6NNZ2 444 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 MUSKO15146 869 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 KDELR3O43731 214 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 FAM155BO75949 473 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 CKMP06732 381 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 BRAFP15056 766 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 TPH1P17752 444 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 PFKLP17858 780 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 GLDCP23378 1020 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 HOXA9P31269 272 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 LSP1P33241 339 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 MAGEA10P43363 369 aaPredicted RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 DSC2Q02487 901 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 CDH17Q12864 832 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 TUBB8Q3ZCM7 444 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 TMCO4Q5TGY1 634 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 CES3Q6UWW8 571 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 LRRC6Q86X45 466 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 ZNF354CQ86Y25 554 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 PPM1NQ8N819 430 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 DNAAF3Q8N9W5 541 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 IPMKQ8NFU5 416 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 ATXN2LQ8WWM7 1075 aaKnown RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 CENPTQ96BT3 561 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 ZNF599Q96NL3 588 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 PPP1R2P1Q96PQ5 205 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 TGS1Q96RS0 853 aaKnown RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 ATP13A1Q9HD20 1204 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 LAMA3Q16787 3333 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 ZCWPW2A0A1B0GU75 182 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 TMEM120BA0PK00 339 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 PER2O15055 1255 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 TBL1XO60907 577 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 PMPCBO75439 489 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 RHOCP08134 193 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 PTPN2P17706 415 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 KRT15P19012 456 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 ETFBP38117 255 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 WNT3AP56704 352 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 MPP3Q13368 585 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 SLC5A9Q2M3M2 681 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 SLC26A11Q86WA9 606 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 SAMD11Q96NU1 681 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 FICDQ9BVA6 458 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 IL22Q9GZX6 179 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
PVT1-203ENST00000513868 TRABDQ9H4I3 376 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 CFAP97Q9P2B7 532 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms