RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SULT2A1Q06520 285 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 GALNT2Q10471 571 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ENPP2Q13822 863 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 STARD3Q14849 445 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ANGPT1Q15389 498 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 DLG2Q15700 870 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 PPP2R5EQ16537 467 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 POM121L1PQ3SYA9 428 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 TFDP3Q5H9I0 405 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ATXN7L2Q5T6C5 722 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 SDE2Q6IQ49 451 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 RETSATQ6NUM9 610 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 KIAA1324Q6UXG2 1013 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ADAT2Q7Z6V5 191 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 RCOR2Q8IZ40 523 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 STK40Q8N2I9 435 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 RYBPQ8N488 228 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 CHST14Q8NCH0 376 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 PRSS33Q8NF86 280 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 MDGA1Q8NFP4 955 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 FRS2Q8WU20 508 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 HMGB4Q8WW32 186 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF419Q96HQ0 510 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 TLR10Q9BXR5 811 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 C10orf88Q9H8K7 445 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 CD248Q9HCU0 757 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 PRSS16Q9NQE7 514 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 UBA2Q9UBT2 640 aaPredicted RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 RAPGEFL1Q9UHV5 662 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 IPO11Q9UI26 975 aaKnown RBP9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 HPCAL4Q9UM19 191 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 HS3ST2Q9Y278 367 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 CACNA1IQ9P0X4 2223 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 EML5Q05BV3 1969 aa9.99□□□□□ -0.81
TOPBP1-209ENST00000513818 TTC24A2A3L6 582 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF487B1APH4 448 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 PLK4O00444 970 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 MUSKO15146 869 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 TIMM44O43615 452 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 ATP9BO43861 1147 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 KIF5CO60282 957 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 SYNCRIPO60506 623 aaKnown RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 MAFKO60675 156 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF821O75541 412 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 APBB3O95704 486 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 TDGF1P13385 188 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 GABRG2P18507 467 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 NNMTP40261 264 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 GARSP41250 739 aaKnown RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 RGRP47804 291 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 PSMD8P48556 350 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 FNTBP49356 437 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 METAP1P53582 386 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 COPAP53621 1224 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 GNG11P61952 73 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC10A7Q0GE19 358 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 SRSF5Q13243 272 aaKnown RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 TFDP2Q14188 446 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 CYTH1Q15438 398 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 KCTD19Q17RG1 926 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 HNRNPA1L2Q32P51 320 aaKnown RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 C9orf64Q5T6V5 341 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 SEL1L2Q5TEA6 688 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 CCDC181Q5TID7 509 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 PGBD3Q8N328 593 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 LZTR1Q8N653 840 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 CCDC26Q8TAB7 109 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 GRIN3AQ8TCU5 1115 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 PTPRN2Q92932 1015 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 OLFM3Q96PB7 478 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 WDR24Q96S15 920 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 LGMNQ99538 433 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 IER2Q9BTL4 223 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 MKRN2Q9H000 416 aaKnown RBP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 RETREG1Q9H6L5 497 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 SMARCAL1Q9NZC9 954 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 BCCIPQ9P287 314 aaKnown RBP eCLIP9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 LHX3Q9UBR4 397 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 INVSQ9Y283 1065 aa9.98□□□□□ -0.81
TOPBP1-209ENST00000513818 EDDM13A0A1B0GTR0 161 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 H0Y858 1186 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 KCNK1O00180 336 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 FANCGO15287 622 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 INSIG1O15503 277 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 PEX11BO96011 259 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 CTSLP07711 333 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 TGM2P21980 687 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 CCNHP51946 323 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 DGKEP52429 567 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 MAXP61244 160 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 RHOAP61586 193 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 OTUD4Q01804 1114 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 IL10RBQ08334 325 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 AP1B1Q10567 949 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 ZBTB17Q13105 803 aa9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 CAMK2GQ13555 558 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
TOPBP1-209ENST00000513818 DPY19L3Q6ZPD9 716 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms