RNA–Protein interactions for RNA: ENST00000513749.5

DDR1-274, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-274ENST00000513749 PXNP49023 591 aaPredicted RBP20.27■□□□□ 0.84
DDR1-274ENST00000513749 FNTBP49356 437 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 PTPN5P54829 565 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 ELAVL3Q14576 367 aaKnown RBP20.27■□□□□ 0.84
DDR1-274ENST00000513749 MEI1Q5TIA1 1274 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 DCAF12L1Q5VU92 463 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 TRIM58Q8NG06 486 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 HMGB4Q8WW32 186 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 FATE1Q969F0 183 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 ZNF599Q96NL3 588 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 OLFM3Q96PB7 478 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 TSGA13Q96PP4 275 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 MAK16Q9BXY0 300 aaKnown RBP20.27■□□□□ 0.84
DDR1-274ENST00000513749 IRF2BPLQ9H1B7 796 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 FCF1Q9Y324 198 aaKnown RBP20.27■□□□□ 0.84
DDR1-274ENST00000513749 HCN4Q9Y3Q4 1203 aa20.27■□□□□ 0.84
DDR1-274ENST00000513749 APOL1O14791 398 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 TMCC1O94876 653 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 PYGMP11217 842 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 KRT10P13645 584 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 GARSP41250 739 aaKnown RBP20.26■□□□□ 0.83
DDR1-274ENST00000513749 RPS14P62263 151 aaKnown RBP20.26■□□□□ 0.83
DDR1-274ENST00000513749 ZBTB16Q05516 673 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 TFDP2Q14188 446 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 RFTN1Q14699 578 aaPredicted RBP20.26■□□□□ 0.83
DDR1-274ENST00000513749 CYTH1Q15438 398 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 ACCSLQ4AC99 568 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 ODF2Q5BJF6 829 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 Q6ZVU0 165 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 UBL4BQ8N7F7 174 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 ALS2CR12Q96Q35 445 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 HERPUD2Q9BSE4 406 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 SLC6A17Q9H1V8 727 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 USP36Q9P275 1121 aaKnown RBP20.26■□□□□ 0.83
DDR1-274ENST00000513749 UBA2Q9UBT2 640 aaPredicted RBP20.26■□□□□ 0.83
DDR1-274ENST00000513749 PPM1HQ9ULR3 514 aa20.26■□□□□ 0.83
DDR1-274ENST00000513749 CST8O60676 142 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 GSRP00390 522 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 IGLV3-19P01714 112 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 CNR2P34972 360 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 NR2C2P49116 596 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 MAP7D1Q3KQU3 841 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 LEKR1Q6ZMV7 388 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 ZNF354CQ86Y25 554 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 RFX6Q8HWS3 928 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 STK40Q8N2I9 435 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.25■□□□□ 0.83
DDR1-274ENST00000513749 HDAC11Q96DB2 347 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 ERLEC1Q96DZ1 483 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 ITM2CQ9NQX7 267 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 KCND1Q9NSA2 647 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 SHROOM3Q8TF72 1996 aa20.25■□□□□ 0.83
DDR1-274ENST00000513749 CTSLP07711 333 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 MX2P20592 715 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 TGM2P21980 687 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 CCNCP24863 283 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 ZNF33AQ06730 810 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 CARD16Q5EG05 197 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 ZNF776Q68DI1 518 aaPredicted RBP20.24■□□□□ 0.83
DDR1-274ENST00000513749 HEATR6Q6AI08 1181 aaKnown RBP20.24■□□□□ 0.83
DDR1-274ENST00000513749 DPY19L3Q6ZPD9 716 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 BBS12Q6ZW61 710 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 ATPAF2Q8N5M1 289 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 TEX26Q8N6G2 289 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 MAML1Q92585 1016 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 FAM131CQ96AQ9 280 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 SIPA1Q96FS4 1042 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 OSBPL8Q9BZF1 889 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 TNKS2Q9H2K2 1166 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 SP110Q9HB58 689 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 LHX3Q9UBR4 397 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 SCML1Q9UN30 329 aa20.24■□□□□ 0.83
DDR1-274ENST00000513749 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDR1-274ENST00000513749 ZBTB24O43167 697 aaPredicted RBP20.23■□□□□ 0.83
DDR1-274ENST00000513749 HRO43593 1189 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 MAP3K6O95382 1288 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 P2RY2P41231 377 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 PPIDQ08752 370 aaKnown RBP20.23■□□□□ 0.83
DDR1-274ENST00000513749 TMCO4Q5TGY1 634 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 AADACL2Q6P093 401 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 CCDC50Q8IVM0 306 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 TMIEQ8NEW7 156 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 OR2AP1Q8NGE2 309 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 OR8D1Q8WZ84 308 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 PRCCQ92733 491 aaPredicted RBP20.23■□□□□ 0.83
DDR1-274ENST00000513749 ZNF419Q96HQ0 510 aaPredicted RBP20.23■□□□□ 0.83
DDR1-274ENST00000513749 PSKH2Q96QS6 385 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 TLR10Q9BXR5 811 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 TPSD1Q9BZJ3 242 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDR1-274ENST00000513749 SARDHQ9UL12 918 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 WASF2Q9Y6W5 498 aa20.23■□□□□ 0.83
DDR1-274ENST00000513749 USP27XA6NNY8 438 aa20.22■□□□□ 0.83
DDR1-274ENST00000513749 ZNF217O75362 1048 aa20.22■□□□□ 0.83
DDR1-274ENST00000513749 CSNK1DP48730 415 aa20.22■□□□□ 0.83
DDR1-274ENST00000513749 SNRPD1P62314 119 aaKnown RBP20.22■□□□□ 0.83
DDR1-274ENST00000513749 NSUN2Q08J23 767 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDR1-274ENST00000513749 SLC10A7Q0GE19 358 aa20.22■□□□□ 0.83
DDR1-274ENST00000513749 KLF1Q13351 362 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms