RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, human

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HTT-210	ENST00000512909	TBL3	Q12788	808 aa	Known RBP	4.59	□□□□□ -1.67
HTT-210	ENST00000512909	THOC5	Q13769	683 aa	Known RBP	4.59	□□□□□ -1.67
HTT-210	ENST00000512909	GPR68	Q15743	365 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	NFIL3	Q16649	462 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	GXYLT1	Q4G148	440 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	AWAT1	Q58HT5	328 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	CBWD5	Q5RIA9	395 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	NAA35	Q5VZE5	725 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	DENND1B	Q6P3S1	775 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	LRIG3	Q6UXM1	1119 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909		Q6ZPA2	131 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	LRRC8D	Q7L1W4	858 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	NRAP	Q86VF7	1730 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	TMEM200A	Q86VY9	491 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	HERC6	Q8IVU3	1022 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	ESX1	Q8N693	406 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	RITA1	Q96K30	269 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	C5orf34	Q96MH7	638 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	REEP2	Q9BRK0	252 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	KRTAP9-3	Q9BYQ3	159 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	GPR63	Q9BZJ6	419 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	UBA5	Q9GZZ9	404 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	VEZT	Q9HBM0	779 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	ARL15	Q9NXU5	204 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	SAGE1	Q9NXZ1	904 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	ADAM21	Q9UKJ8	722 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	DNAJC16	Q9Y2G8	782 aa		4.59	□□□□□ -1.67
HTT-210	ENST00000512909	AKAP12	Q02952	1782 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	LMO7	Q8WWI1	1683 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	DISP2	A7MBM2	1401 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	TCRBV5S1A1T	A0A578	114 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	ERVV-2	B6SEH9	535 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	PRY	O14603	147 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	MSI1	O43347	362 aa	Known RBP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CNP	P09543	421 aa	Known RBP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CYP2A6	P11509	494 aa	Predicted RBP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CKMT1A	P12532	417 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	PKM	P14618	531 aa	Known RBP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	ST6GAL1	P15907	406 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CHRNA5	P30532	468 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	RFC4	P35249	363 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	GPD2	P43304	727 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CPA2	P48052	419 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	PTH2R	P49190	550 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CYP2J2	P51589	502 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	KRTAP10-2	P60368	255 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	ARHGAP8	P85298	464 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	HSF1	Q00613	529 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CHRND	Q07001	517 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	SLC39A6	Q13433	755 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	GAB1	Q13480	694 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	STIM1	Q13586	685 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	DCTN1	Q14203	1278 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	NAA25	Q14CX7	972 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	MTHFSD	Q2M296	383 aa	Known RBP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	MAP3K21	Q5TCX8	1036 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	SLC22A25	Q6T423	547 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	IGFN1	Q86VF2	1251 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	KLB	Q86Z14	1044 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	RHPN2	Q8IUC4	686 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	TTC5	Q8N0Z6	440 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	GHDC	Q8N2G8	530 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	REPS1	Q96D71	796 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	TWNK	Q96RR1	684 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	CADM1	Q9BY67	442 aa	Known RBP	4.58	□□□□□ -1.68
HTT-210	ENST00000512909	UNC45A	Q9H3U1	944 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	NRIP3	Q9NQ35	241 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	WASH6P	Q9NQA3	447 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	KL	Q9UEF7	1012 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	TBX20	Q9UMR3	447 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	RGPD5	Q99666	1765 aa		4.58	□□□□□ -1.68
HTT-210	ENST00000512909	TNS2	Q63HR2	1409 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	NSD2	O96028	1365 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	KIF24	Q5T7B8	1368 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	PALLD	Q8WX93	1383 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	VWA3A	A6NCI4	1184 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	MANSC4	A6NHS7	340 aa	Predicted RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	FAM90A20P	A6NIJ5	464 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	MCIDAS	D6RGH6	385 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	RNMT	O43148	476 aa	Known RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	HOXC11	O43248	304 aa	Predicted RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	KIF1C	O43896	1103 aa	Known RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	SGPL1	O95470	568 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	CBX6	O95503	412 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	METTL18	O95568	372 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	MBP	P02686	304 aa	Predicted RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	PRKCG	P05129	697 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	PPP2R1A	P30153	589 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	PRKAR2B	P31323	418 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	ELF1	P32519	619 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	PSMC2	P35998	433 aa	Known RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	FOXL2	P58012	376 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	RPP30	P78346	268 aa	Known RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	B4GALNT1	Q00973	533 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	PROSER3	Q2NL68	480 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	SLC9C1	Q4G0N8	1177 aa		4.57	□□□□□ -1.68
HTT-210	ENST00000512909	ARL13A	Q5H913	290 aa	Predicted RBP	4.57	□□□□□ -1.68
HTT-210	ENST00000512909	KIAA1614	Q5VZ46	1190 aa		4.57	□□□□□ -1.68

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