RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 NMT1P30419 496 aaKnown RBP9.05□□□□□ -0.96
VCAN-208ENST00000512590 GLUD2P49448 558 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 TUBP50607 506 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 CTBP2P56545 445 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 BACE1P56817 501 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 MRPL49Q13405 166 aaKnown RBP9.05□□□□□ -0.96
VCAN-208ENST00000512590 GIT2Q14161 759 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 ATP13A5Q4VNC0 1218 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 CXCL17Q6UXB2 119 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.05□□□□□ -0.96
VCAN-208ENST00000512590 RAB11FIP2Q7L804 512 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 LIX1LQ8IVB5 337 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 SNX33Q8WV41 574 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 APBA2Q99767 749 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 MXRA8Q9BRK3 442 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 VPS33BQ9H267 617 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 MTRRQ9UBK8 725 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 RSL24D1Q9UHA3 163 aaKnown RBP9.05□□□□□ -0.96
VCAN-208ENST00000512590 INVSQ9Y283 1065 aa9.05□□□□□ -0.96
VCAN-208ENST00000512590 CCT8L1PA6NM43 557 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ZNF726A6NNF4 738 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ATP8B1O43520 1251 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 RGS14O43566 566 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ATP6V1B1P15313 513 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ALDH5A1P51649 535 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 TERF2Q15554 542 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 EIF2S3LQ2VIR3 472 aaKnown RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 PDCD4Q53EL6 469 aaKnown RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 EOGTQ5NDL2 527 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 EDEM1Q92611 657 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ZSWIM5Q9P217 1185 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 PCDHA7Q9UN72 937 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TCOF1Q13428 1488 aaKnown RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 ASXL1Q8IXJ9 1541 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ULK1O75385 1050 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 PSIP1O75475 530 aaKnown RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 BMP7P18075 431 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 UGT1A1P22309 533 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 GSTM5P46439 218 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ALDH3A2P51648 485 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 RHBDL3P58872 404 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ZNF200P98182 395 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 SBK1Q52WX2 424 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TMEM35AQ53FP2 167 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 RSBN1Q5VWQ0 802 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 ARMC8Q8IUR7 673 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 DENND1CQ8IV53 801 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 UBR7Q8N806 425 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 DENND6BQ8NEG7 585 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 HMG20AQ9NP66 347 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 POLE4Q9NR33 117 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 CDC14AQ9UNH5 594 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 CYP1A1P04798 512 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 MAP2K2P36507 400 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 PIK3CGP48736 1102 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 HLFQ16534 295 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 PIK3R6Q5UE93 754 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 GTF2IRD2BQ6EKJ0 949 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 METTL7BQ6UX53 244 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 DGLUCYQ7Z3D6 616 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 GTF2IRD2Q86UP8 949 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 MARCH10Q8NA82 808 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 APBB2Q92870 758 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 COQ7Q99807 217 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 SHCBP1LQ9BZQ2 653 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 OSGEPQ9NPF4 335 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TMEM138Q9NPI0 162 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 C19orf25Q9UFG5 118 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 UMODL1Q5DID0 1318 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 FAM155AB1AL88 458 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 E2F3O00716 465 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ZNF500O60304 480 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 CHMP24386 653 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TGFBR2P37173 567 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 SLC26A2P50443 739 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 MLLT1Q03111 559 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 TUBB3Q13509 450 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 KLHL26Q53HC5 615 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 AP1ARQ63HQ0 302 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 SLC30A5Q8TAD4 765 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ETNPPLQ8TBG4 499 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 ZSWIM3Q96MP5 696 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 CCDC162PA2VCL2 907 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 HEXAP06865 529 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 MMP3P08254 477 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 DGKAP23743 735 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 NDST1P52848 882 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 ORC1Q13415 861 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 NR1D2Q14995 579 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 VITQ6UXI7 678 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 TMEM26Q6ZUK4 368 aa9.04□□□□□ -0.96
VCAN-208ENST00000512590 UBE2R2Q712K3 238 aaPredicted RBP9.04□□□□□ -0.96
VCAN-208ENST00000512590 MILR1Q7Z6M3 343 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms