RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RECQL5O94762 991 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 HSPA8P11142 646 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CDK4P11802 303 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CTSKP43235 329 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 PCP4P48539 62 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARSEP51690 589 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC39A14Q15043 492 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 INSCQ1MX18 579 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGAP17Q68EM7 881 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 KRT80Q6KB66 452 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 USP17L6PQ6QN14 398 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CRTC3Q6UUV7 619 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SERPINA13PQ6UXR4 307 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 Q6ZVU0 165 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SERPINA12Q8IW75 414 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRPL41Q8IXM3 137 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MPP5Q8N3R9 675 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ATAD1Q8NBU5 361 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 PIWIL1Q96J94 861 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 PSKH2Q96QS6 385 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SMC6Q96SB8 1091 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 FIZ1Q96SL8 496 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 JPH2Q9BR39 696 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC4A5Q9BY07 1137 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 KAT14Q9H8E8 782 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZSCAN32Q9NX65 697 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 PRSS50Q9UI38 385 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ANAPC2Q9UJX6 822 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CDC14AQ9UNH5 594 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGEF28Q8N1W1 1705 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 TMEM2Q9UHN6 1383 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MEX3AA1L020 520 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM171A2A8MVW0 826 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 H7C1W4 665 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 AXIN1O15169 862 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ST8SIA3O43173 380 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 EXTL3O43909 919 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 BUB1BO60566 1050 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 DLGAP3O95886 979 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC6A9P48067 706 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 LIG4P49917 911 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CAP1Q01518 475 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 GSTM4Q03013 218 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CBFBQ13951 182 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 COTL1Q14019 142 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 DCAF12L1Q5VU92 463 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 TTC19Q6DKK2 380 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 ANO7Q6IWH7 933 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MTSS1LQ765P7 747 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRPL50Q8N5N7 158 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 LZTR1Q8N653 840 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 NHLRC2Q8NBF2 726 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MYCBPAPQ8TBZ2 947 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 CYB5D2Q8WUJ1 264 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 RRNAD1Q96FB5 475 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SNX27Q96L92 541 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRGPRX4Q96LA9 322 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 FCRL3Q96P31 734 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 NAP1L3Q99457 506 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 GPR20Q99678 358 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SERHL2Q9H4I8 314 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRPL47Q9HD33 250 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 WSB2Q9NYS7 404 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC25A10Q9UBX3 287 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 TRPS1Q9UHF7 1281 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 NENFQ9UMX5 172 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 GABRQQ9UN88 632 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 SETD1AO15047 1707 aaKnown RBP6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 QRICH2Q9H0J4 1663 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 NRXN3Q9Y4C0 1643 aa6.43□□□□□ -1.38
TRAPPC11-209ENST00000512476 A0A1W2PQF6 199 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TRBC2A0A5B9 178 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SIAH2O43255 324 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZNF821O75541 412 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ABHD16AO95870 558 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MT-ATP6P00846 226 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ENDOUP21128 410 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MSX2P35548 267 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 HK2P52789 917 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SCN1BQ07699 218 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TRAF1Q13077 416 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 KLF10Q13118 480 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 Q5PR19 223 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 PLA2G4FQ68DD2 849 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 NCEH1Q6PIU2 408 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SPATA19Q7Z5L4 167 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TCAIMQ8N3R3 496 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SHCBP1Q8NEM2 672 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM76AQ8TAV0 307 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SGF29Q96ES7 293 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC30A3Q99726 388 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MGME1Q9BQP7 344 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TLR10Q9BXR5 811 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 GIMAP4Q9NUV9 329 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 OR6C2Q9NZP2 312 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 GMEB2Q9UKD1 530 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms