RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 TOE1Q96GM8 510 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CELF6Q96J87 481 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 OMDQ99983 421 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF670Q9BS34 389 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CALN1Q9BXU9 219 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 KLC2Q9H0B6 622 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 BTBD1Q9H0C5 482 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 TNKS2Q9H2K2 1166 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 PABPC3Q9H361 631 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 CD93Q9NPY3 652 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 RRAGDQ9NQL2 400 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 FBXL12Q9NXK8 326 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 WSB2Q9NYS7 404 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 PPM1HQ9ULR3 514 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 TFR2Q9UP52 801 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 FCF1Q9Y324 198 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 REXO2Q9Y3B8 237 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 PCDHGA5Q9Y5G8 931 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ACTL7AQ9Y615 435 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 ALG6Q9Y672 507 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 DOCK4Q8N1I0 1966 aa7.29□□□□□ -1.24
PDLIM5-215ENST00000511586 MUC22E2RYF6 1773 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 A0A1W2PP55 124 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 BCLAF3A2AJT9 711 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF487B1APH4 448 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 J3KR12 359 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DFFAO00273 331 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF500O60304 480 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PRAMEF11O60813 436 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 LRP3O75074 770 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF821O75541 412 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 RNASEH2AO75792 299 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 TMCC1O94876 653 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 EPN2O95208 641 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PRNPP04156 253 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CD48P09326 243 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 TNNT1P13805 278 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 KDELR1P24390 212 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CHRNA3P32297 505 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 SERPINB6P35237 376 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DPP6P42658 865 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PTGER3P43115 390 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PSMD8P48556 350 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DHPSP49366 369 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 VAV2P52735 878 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 NAP1L1P55209 391 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 SNRPD1P62314 119 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CREB5Q02930 508 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF33AQ06730 810 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 IL10RBQ08334 325 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CCDC15Q0P6D6 951 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 KIF5AQ12840 1032 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 MMRN1Q13201 1228 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DPYSL3Q14195 570 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 RFTN1Q14699 578 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ANKRD20A8PQ5CZ79 823 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ARSIQ5FYB1 569 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 SYCP2LQ5T4T6 812 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 LYSMD4Q5XG99 296 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 C11orf63Q6NUN7 778 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DPY19L3Q6ZPD9 716 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CYP2U1Q7Z449 544 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DAAM2Q86T65 1068 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 VSIG1Q86XK7 387 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 LRRC49Q8IUZ0 686 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 HDDC3Q8N4P3 179 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DCLK2Q8N568 766 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DEFB119Q8N690 84 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CHST14Q8NCH0 376 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ACRBPQ8NEB7 543 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 CCDC112Q8NEF3 446 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 TMIEQ8NEW7 156 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 OR2AP1Q8NGE2 309 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PCDH19Q8TAB3 1148 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PIP4K2CQ8TBX8 421 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 RAPGEF5Q92565 580 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 FAF2Q96CS3 445 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF419Q96HQ0 510 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 HEPHQ9BQS7 1158 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 GPR174Q9BXC1 333 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 TM6SF2Q9BZW4 377 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 LACRTQ9GZZ8 138 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PCED1AQ9H1Q7 454 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 NEUROG2Q9H2A3 272 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ARRDC1-AS1Q9H2J1 176 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 SP110Q9HB58 689 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 PDFQ9HBH1 243 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 SGK2Q9HBY8 427 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DYRK4Q9NR20 520 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 ETNK2Q9NVF9 386 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 KLHL11Q9NVR0 708 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 DDX56Q9NY93 547 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 HECAQ9UBI9 543 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 UBA2Q9UBT2 640 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 IL36AQ9UHA7 158 aa7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 IPO11Q9UI26 975 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-215ENST00000511586 FZD4Q9ULV1 537 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms