RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 FAM220AQ7Z4H9 259 aa8.48□□□□□ -1.05
HTT-208ENST00000510626 PGAM4Q8N0Y7 254 aa8.48□□□□□ -1.05
HTT-208ENST00000510626 OR2B2Q9GZK3 357 aa8.48□□□□□ -1.05
HTT-208ENST00000510626 ASB7Q9H672 318 aa8.48□□□□□ -1.05
HTT-208ENST00000510626 ARHGDIBP52566 201 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ZRANB3Q5FWF4 1079 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 RASGEF1CQ8N431 466 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PJA1Q8NG27 643 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 TNFRSF21O75509 655 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 GPIP06744 558 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 RARAP10276 462 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 CYP2A7P20853 494 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PSME3P61289 254 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 RHBDF1Q96CC6 855 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 MMP19Q99542 508 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 FAM49AQ9H0Q0 323 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 RPS6KA4O75676 772 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SERPINF2P08697 491 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 COL6A2P12110 1019 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ATP6V0D1P61421 351 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 USP43Q70EL4 1123 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 TMEM260Q9NX78 707 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ALDH1A2O94788 518 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 NOS3P29474 1203 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ANTXR2P58335 489 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 IL18R1Q13478 541 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 GOLM1Q8NBJ4 401 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SGO1Q5FBB7 561 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 MACC1Q6ZN28 852 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ZNF438Q7Z4V0 828 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 IPCEF1Q8WWN9 437 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 PABPC5Q96DU9 382 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 FBXO44Q9H4M3 255 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 CASZ1Q86V15 1759 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 FAM205AQ6ZU69 1335 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SERPINB7O75635 380 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 CHSY1Q86X52 802 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 KLHL32Q96NJ5 620 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PAK6Q9NQU5 681 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 SLC9A8Q9Y2E8 581 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ABCC3O15438 1527 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 NPPAP01160 153 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 RPL10AP62906 217 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 MRPS22P82650 360 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 GRB10Q13322 594 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PLD1Q13393 1074 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 LIPMQ5VYY2 423 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 CLNKQ7Z7G1 428 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SRFBP1Q8NEF9 429 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 WRNIP1Q96S55 665 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 KCNQ5Q9NR82 932 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SLC25A27O95847 323 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 BNIP1Q12981 228 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 OOSP2Q86WS3 158 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ZNF829Q3KNS6 432 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 TMPRSS11AQ6ZMR5 421 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 HERC6Q8IVU3 1022 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 TDRD1Q9BXT4 1180 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 PLLPQ9Y342 182 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PDPK1O15530 556 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ATMINO43313 823 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 FAM153BP0C7A2 387 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ITIH1P19827 911 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PTP4A2Q12974 167 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 FAM153CQ494X1 144 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 ANGEL2Q5VTE6 544 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 SLC9A9Q8IVB4 645 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 STAG3L4Q8TBR4 150 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 UNKQ9C0B0 810 aaKnown RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 COPS7BQ9H9Q2 264 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 CLIC5Q9NZA1 410 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 UPB1Q9UBR1 384 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 COQ6Q9Y2Z9 468 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 CHD4Q14839 1912 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PTGES3LE9PB15 166 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 CXCR2P25025 360 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 GRIA3P42263 894 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 CBX3Q13185 183 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 PAGE2Q7Z2X7 111 aa8.47□□□□□ -1.05
HTT-208ENST00000510626 SAE1Q9UBE0 346 aaPredicted RBP8.47□□□□□ -1.05
HTT-208ENST00000510626 FAM172BPA6NC97 362 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 SERPINA1P01009 418 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 GSTT2BP0CG30 244 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 RPA3P35244 121 aaPredicted RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 ERFP50548 548 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 ZNF540Q8NDQ6 660 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 MCOLN3Q8TDD5 553 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 ANGPT4Q9Y264 503 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 SLC2A4P14672 509 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 MAPK8P45983 427 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 SLCO6A1Q86UG4 719 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.05
HTT-208ENST00000510626 ACTR8Q9H981 624 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 ALOX15BO15296 676 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 CHP2O43745 196 aa8.46□□□□□ -1.05
HTT-208ENST00000510626 GPR15P49685 360 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms