RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TTC30AQ86WT1 665 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 FAM129CQ86XR2 697 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 SCN4BQ8IWT1 228 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 LRRC56Q8IYG6 542 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 ARHGAP18Q8N392 663 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 AFAP1L2Q8N4X5 818 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 SMRP1Q8NCR6 262 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 C1orf131Q8NDD1 294 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 STKLD1Q8NE28 680 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZMIZ2Q8NF64 920 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 IPO4Q8TEX9 1081 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 IRGQQ8WZA9 623 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 TFAP2BQ92481 460 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 SMG7Q92540 1137 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 ALG3Q92685 438 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 TSPAN17Q96FV3 270 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 MSLNLQ96KJ4 702 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 SLITRK1Q96PX8 696 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 GCNAQ96QF7 691 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 CDK5RAP1Q96SZ6 601 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 SEPT5Q99719 369 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 SMOQ99835 787 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 AGPAT1Q99943 283 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 S1PR5Q9H228 398 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 HAUS4Q9H6D7 363 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 UBE2ZQ9H832 354 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 LRRC4Q9HBW1 653 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 WDR6Q9NNW5 1121 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 CNGB3Q9NQW8 809 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 ASAH2Q9NR71 780 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 ABHD10Q9NUJ1 306 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 FAM49BQ9NUQ9 324 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 WDR35Q9P2L0 1181 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 CD207Q9UJ71 328 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 NOCTQ9UK39 431 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 CNOT6Q9ULM6 557 aaKnown RBP5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 NOTCH4Q99466 2003 aa5.74□□□□□ -1.49
HMGB1P44-201ENST00000508597 DOCK8Q8NF50 2099 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 HHLA1C9JL84 531 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 FAM47E-STBD1D6RA91 191 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 TBX10O75333 385 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CSPG5O95196 566 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CALB1P05937 261 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CKMP06732 381 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 MMEP08473 750 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 JMJD7P0C870 316 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SPATA31D3P0C874 917 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 UNGP13051 313 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 HMGA1P17096 107 aaKnown RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ATF6P18850 670 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 YWHAQP27348 245 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 NSFP46459 744 aaKnown RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 GABRB2P47870 512 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 TUBP50607 506 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SLC5A3P53794 718 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 GSCP56915 257 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SMAD4Q13485 552 aaKnown RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZNF268Q14587 947 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 DHCR24Q15392 516 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 LEXMQ3ZCV2 418 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ARHGAP15Q53QZ3 475 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 TDRD12Q587J7 1177 aaKnown RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SNX30Q5VWJ9 437 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 PKN3Q6P5Z2 889 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ABHD17CQ6PCB6 329 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 KLHDC10Q6PID8 442 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SPATA31D4Q6ZUB0 917 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 PDZD4Q76G19 769 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ARCQ7LC44 396 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CCDC186Q7Z3E2 898 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ERICH1Q86X53 443 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 KIF18BQ86Y91 864 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 PHF13Q86YI8 300 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 TMTC1Q8IUR5 882 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZC3H7AQ8IWR0 971 aaKnown RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CCDC170Q8IYT3 715 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SIX6OS1Q8N1H7 587 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 TXLNBQ8N3L3 684 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 KIAA1958Q8N8K9 716 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 TC2NQ8N9U0 490 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CCDC112Q8NEF3 446 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 MAFAQ8NHW3 353 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 PCDH19Q8TAB3 1148 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SLC30A5Q8TAD4 765 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 UBA3Q8TBC4 463 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SUSD6Q92537 303 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 GOLGA1Q92805 767 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SECISBP2LQ93073 1101 aaKnown RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 E2F7Q96AV8 911 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZNF707Q96C28 371 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 C18orf8Q96DM3 657 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 PEX11GQ96HA9 241 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 PPP1R13BQ96KQ4 1090 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SIGLEC10Q96LC7 697 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 CCDC42Q96M95 316 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 KCNK16Q96T55 309 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZSWIM1Q9BR11 485 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SYT11Q9BT88 431 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 DEF6Q9H4E7 631 aa5.73□□□□□ -1.49
HMGB1P44-201ENST00000508597 SYNCQ9H7C4 482 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms