RNA–Protein interactions for RNA: ENST00000508490.5

RAP1GDS1-212, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

TSL 4

Gene RAP1GDS1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-212ENST00000508490 BNC1Q01954 994 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CNTN1Q12860 1018 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 POLD3Q15054 466 aaPredicted RBP17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 AGBL4Q5VU57 503 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 HGSNATQ68CP4 663 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PSTKQ8IV42 348 aaKnown RBP17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 RTL3Q8N8U3 475 aaKnown RBP17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 MAGEB5Q9BZ81 275 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 IFNKQ9P0W0 207 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CNOT8Q9UFF9 292 aaKnown RBP17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DNAI1Q9UI46 699 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 LUC7L2Q9Y383 392 aaKnown RBP17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PCDHGB2Q9Y5G2 931 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 NYNRINQ9P2P1 1898 aaKnown RBP17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ADAMTS9Q9P2N4 1935 aa17.11■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 A0A1B0GVT2 93 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 VILLO15195 856 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 KDELR3O43731 214 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 BNIP3LO60238 219 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CD160O95971 181 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CTSLP07711 333 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 KCNA4P22459 653 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PMLP29590 882 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ACVRL1P37023 503 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 METAP1P53582 386 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 YBEYP58557 167 aaPredicted RBP17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 HLA-BQ31612 363 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 NEK5Q6P3R8 708 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DPY19L3Q6ZPD9 716 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TRIM69Q86WT6 500 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PYROXD2Q8N2H3 581 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DEFB124Q8NES8 71 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CASKIN2Q8WXE0 1202 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ZNF653Q96CK0 615 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 HDAC8Q9BY41 377 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 GAREM1Q9H706 876 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PREBQ9HCU5 417 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 IL36AQ9UHA7 158 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ANKRD6Q9Y2G4 727 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 SLCO1B1Q9Y6L6 691 aa17.1■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CABIN1Q9Y6J0 2220 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TPRP12270 2363 aaKnown RBP17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 GIPC1O14908 333 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CREB3O43889 395 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DFNA5O60443 496 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 RNF8O76064 485 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ZNF135P52742 658 aaPredicted RBP17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 SHC2P98077 582 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ACAP1Q15027 740 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 KIF19Q2TAC6 998 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PARP15Q460N3 678 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 TDRD12Q587J7 1177 aaKnown RBP17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 CARD16Q5EG05 197 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ERMARDQ5T6L9 678 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DBX2Q6ZNG2 339 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 ADAT2Q7Z6V5 191 aaKnown RBP17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PRPF39Q86UA1 669 aaKnown RBP17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 UMODL1-AS1Q8N2C9 162 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 OR2I1PQ8NGU4 316 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 PPP1R16AQ96I34 528 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 LRIG1Q96JA1 1093 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 HEPHQ9BQS7 1158 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 EBF2Q9HAK2 575 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DYRK4Q9NR20 520 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 DMTF1Q9Y222 760 aa17.09■□□□□ 0.33
RAP1GDS1-212ENST00000508490 KPNA3O00505 521 aaPredicted RBP17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 GYPCP04921 128 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 HNRNPH3P31942 346 aaKnown RBP17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 PCK1P35558 622 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 CTSKP43235 329 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 ZNF252P-AS1Q0IIN9 211 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 INO80DQ53TQ3 878 aaPredicted RBP17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 ARSIQ5FYB1 569 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 PIP5KL1Q5T9C9 394 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 ERN2Q76MJ5 926 aaKnown RBP17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 ARFGAP1Q8N6T3 406 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 CHST14Q8NCH0 376 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 CPLX3Q8WVH0 158 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 TNKS2Q9H2K2 1166 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 NOL6Q9H6R4 1146 aaKnown RBP17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 TM7SF3Q9NS93 570 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 ARHGAP20Q9P2F6 1191 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 AP4E1Q9UPM8 1137 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 WASF2Q9Y6W5 498 aa17.08■□□□□ 0.32
RAP1GDS1-212ENST00000508490 A0A1W2PR77 199 aa17.07■□□□□ 0.32
RAP1GDS1-212ENST00000508490 PLK4O00444 970 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms